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Molecular Communication (MC) is an important nanoscale communication paradigm, which is employed for the interconnection of the nanomachines (NMs) to form nanonetworks. A transmitter NM (TN) sends the information symbols by emitting…

Signal Processing · Electrical Eng. & Systems 2020-03-27 Baris Atakan , Fatih Gulec

In this paper, we consider a mobile molecular communication (MC) system consisting of two mobile nanomachines, a transmitter and a receiver, propelled by a positive drift velocity and Brownian motion in a realistic blood-vessel-type flow…

Information Theory · Computer Science 2022-05-20 Dongliang Jing , Yongzhao Li , Andrew W. Eckford

Diffusion probabilistic models (DPMs) and their extensions have emerged as competitive generative models yet confront challenges of efficient sampling. We propose a new bilateral denoising diffusion model (BDDM) that parameterizes both the…

Audio and Speech Processing · Electrical Eng. & Systems 2022-03-28 Max W. Y. Lam , Jun Wang , Dan Su , Dong Yu

Symbol synchronization refers to the estimation of the start of a symbol interval and is needed for reliable detection. In this paper, we develop a symbol synchronization framework for molecular communication (MC) systems where we consider…

Information Theory · Computer Science 2017-02-24 Vahid Jamali , Arman Ahmadzadeh , Robert Schober

Current SMILES-based diffusion models for molecule generation typically support only unimodal constraint. They inject conditioning signals at the start of the training process and require retraining a new model from scratch whenever the…

Machine Learning · Computer Science 2025-08-21 Yunzhe Zhang , Yifei Wang , Khanh Vinh Nguyen , Pengyu Hong

In this paper, we propose a molecular communication system to localize an abnormality in a diffusion based medium. We consider a general setup to perform joint sensing, communication and localization. This setup consists of three types of…

Signal Processing · Electrical Eng. & Systems 2022-04-01 Ladan Khaloopour , Mahtab Mirmohseni , Masoumeh Nasiri-Kenari

Diffusion models have emerged as powerful tools for molecular generation, particularly in the context of 3D molecular structures. Inspired by non-equilibrium statistical physics, these models can generate 3D molecular structures with…

Chemical Physics · Physics 2025-05-16 Amira Alakhdar , Barnabas Poczos , Newell Washburn

Molecular Communication (MC) is an emerging field of research focused on understanding how cells in the human body communicate and exploring potential medical applications. In theoretical analysis, the goal is to investigate cellular…

Information Theory · Computer Science 2025-12-19 Wafa Labidi , Vida Gholamian , Yaning Zhao , Christian Deppe , Holger Boche

Accurate dose distribution prediction is crucial in the radiotherapy planning. Although previous methods based on convolutional neural network have shown promising performance, they have the problem of over-smoothing, leading to prediction…

Image and Video Processing · Electrical Eng. & Systems 2024-10-31 Xin Liao , Zhenghao Feng , Jianghong Xiao , Xingchen Peng , Yan Wang

Diffusion Probabilistic Models (DPMs) have demonstrated significant potential in 3D medical image segmentation tasks. However, their high computational cost and inability to fully capture global 3D contextual information limit their…

Image and Video Processing · Electrical Eng. & Systems 2025-04-17 Kangbo Ma

A one-dimensional (1-D) anomalous-diffusive molecular communication channel is considered, wherein the devices (transmitter (TX) and receiver (RX)) can move in either direction along the axis. For modeling the anomalous diffusion of…

Signal Processing · Electrical Eng. & Systems 2022-03-29 Lokendra Chouhan , Prabhat Kumar Upadhyay , Prabhat Kumar Sharma , Anas M. Salhab

This paper presents a Markov-based system model for microfluidic molecular communication (MC) channels. By discretizing the advection-diffusion dynamics, the proposed model establishes a physically consistent state-space formulation. The…

Emerging Technologies · Computer Science 2025-11-11 Ruifeng Zheng , Pengjie Zhou , Pit Hofmann , Fatima Rani , Juan A. Cabrera , Frank H. P. Fitzek

Molecular communication is an emerging paradigm for systems that rely on the release of molecules as information carriers. Communication via molecular diffusion is a popular strategy that is ubiquitous in nature and very fast over distances…

Emerging Technologies · Computer Science 2016-09-13 Adam Noel , Dimitrios Makrakis , Abdelhakim Hafid

Molecular dynamics (MD) simulations are used to investigate $^1$H nuclear magnetic resonance (NMR) relaxation and diffusion of bulk $n$-C$_5$H$_{12}$ to $n$-C$_{17}$H$_{36}$ hydrocarbons and bulk water. The MD simulations of the $^1$H NMR…

Chemical Physics · Physics 2017-03-08 P. M. Singer , D. Asthagiri , W. G. Chapman , G. J. Hirasaki

In this paper, we present an analytical model for a diffusive molecular communication (MC) system with a reversible adsorption receiver in a fluid environment. The time-varying spatial distribution of the information molecules under the…

Information Theory · Computer Science 2016-04-08 Yansha Deng , Adam Noel , Maged Elkashlan , Arumugam Nallanathan , Karen C. Cheung

This paper proposes a novel imperfect spherical transmitter (TX) model, namely the membrane fusion (MF)-based TX, that adopts MF between a vesicle and the TX membrane to release molecules encapsulated within the vesicle. For the MF-based…

Emerging Technologies · Computer Science 2021-02-17 Xinyu Huang , Yuting Fang , Adam Noel , Nan Yang

In this paper, a diffusion-based molecular communication channel between two nano-machines is considered. The effect of the amount of memory on performance is characterized, and a simple memory-limited decoder is proposed and its…

Biological Physics · Physics 2014-05-05 Reza Mosayebi , Hamidreza Arjmandi , Amin Gohari , Masoumeh Nasiri Kenari , Urbashi Mitra

This letter develops a one-dimensional (1D) diffusion-based molecular communication system to analyze channel responses between a single transmitter (TX) and two fully-absorbing receivers (RXs). Incorporating molecular degradation in the…

Emerging Technologies · Computer Science 2020-03-24 Xinyu Huang , Yuting Fang , Adam Noel , Nan Yang

Molecular communications is a promising framework for the design of controlled-release drug delivery systems. In this framework, drug carriers are modeled as transmitters, the diseased cells as absorbing receivers, and the channel between…

This survey paper focuses on modulation aspects of molecular communication, an emerging field focused on building biologically-inspired systems that embed data within chemical signals. The primary challenges in designing these systems are…

Emerging Technologies · Computer Science 2020-12-29 Mehmet Sukru Kuran , H. Birkan Yilmaz , Ilker Demirkol , Nariman Farsad , Andrea Goldsmith
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