Related papers: Improving Multi-Word Entity Recognition for Biomed…
Biomedical named entities often play important roles in many biomedical text mining tools. However, due to the incompleteness of provided synonyms and numerous variations in their surface forms, normalization of biomedical entities is very…
In medical information extraction, medical Named Entity Recognition (NER) is indispensable, playing a crucial role in developing medical knowledge graphs, enhancing medical question-answering systems, and analyzing electronic medical…
The surging amount of biomedical literature & digital clinical records presents a growing need for text mining techniques that can not only identify but also semantically relate entities in unstructured data. In this paper we propose a text…
Bioinformatics workflows are essential for complex biological data analyses and are often described in scientific articles with source code in public repositories. Extracting detailed workflow information from articles can improve…
Automatically locating named entities in natural language text - named entity recognition - is an important task in the biomedical domain. Many named entity mentions are ambiguous between several bioconcept types, however, causing text…
Most existing methods for biomedical entity recognition task rely on explicit feature engineering where many features either are specific to a particular task or depends on output of other existing NLP tools. Neural architectures have been…
The objective of an expert recommendation system is to trace a set of candidates' expertise and preferences, recognize their expertise patterns, and identify experts. In this paper, we introduce a multimodal classification approach for…
Named Entity Recognition (NER) is a critical component of Natural Language Processing with diverse applications in information extraction and conversational AI. However, NER in specific domains for low-resource languages faces challenges…
Recent advances in large language models (LLMs) and biomedical foundation models (BioFMs) have achieved strong results in biological text reasoning, molecular modeling, and single-cell analysis, yet they remain siloed in disjoint embedding…
Named entity recognition (NER) from text has been a widely studied problem and usually extracts semantic information from text. Until now, NER from speech is mostly studied in a two-step pipeline process that includes first applying an…
In this paper, the authors propose TriBERTa, a supervised entity resolution system that utilizes a pre-trained large language model and a triplet loss function to learn representations for entity matching. The system consists of two steps:…
Named entity recognition (NER) is a foundational technology for information extraction. This paper presents a flexible NER framework compatible with different languages and domains. Inspired by the idea of distant supervision (DS), this…
Spoken Named Entity Recognition (NER) aims to extract named entities from speech and categorise them into types like person, location, organization, etc. In this work, we present VietMed-NER - the first spoken NER dataset in the medical…
Recognizing named entities in a document is a key task in many NLP applications. Although current state-of-the-art approaches to this task reach a high performance on clean text (e.g. newswire genres), those algorithms dramatically degrade…
Developing high-performing systems for detecting biomedical named entities has major implications. State-of-the-art deep-learning based solutions for entity recognition often require large annotated datasets, which is not available in the…
Named Entity Recognition (NER) is one of the most common tasks of the natural language processing. The purpose of NER is to find and classify tokens in text documents into predefined categories called tags, such as person names, quantity…
Building real-world complex Named Entity Recognition (NER) systems is a challenging task. This is due to the complexity and ambiguity of named entities that appear in various contexts such as short input sentences, emerging entities, and…
This paper studies the multimodal named entity recognition (MNER) and multimodal relation extraction (MRE), which are important for multimedia social platform analysis. The core of MNER and MRE lies in incorporating evident visual…
We present NEAMER -- Named Entity Augmented Multi-word Expression Recognizer. This system is inspired by non-compositionality characteristics shared between Named Entity and Idiomatic Expressions. We utilize transfer learning and locality…
Named entity recognition (NER) is a natural language processing task (NLP), which aims to identify named entities and classify them like person, location, organization, etc. In the Arabic language, we can find a considerable size of…