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Brain lesion volume measured on T2 weighted MRI images is a clinically important disease marker in multiple sclerosis (MS). Manual delineation of MS lesions is a time-consuming and highly operator-dependent task, which is influenced by…

Image and Video Processing · Electrical Eng. & Systems 2023-11-28 Hang Zhang , Jinwei Zhang , Qihao Zhang , Jeremy Kim , Shun Zhang , Susan A. Gauthier , Pascal Spincemaille , Thanh D. Nguyen , Mert R. Sabuncu , Yi Wang

The task of automatically segmenting 3-D surfaces representing boundaries of objects is important for quantitative analysis of volumetric images, and plays a vital role in biomedical image analysis. Recently, graph-based methods with a…

Computer Vision and Pattern Recognition · Computer Science 2018-01-10 Abhay Shah , Michael Abramoff , Xiaodong Wu

Accurately estimating and correcting the motion artifacts are crucial for 3D image reconstruction of the abdominal and in-utero magnetic resonance imaging (MRI). The state-of-art methods are based on slice-to-volume registration (SVR) where…

Image and Video Processing · Electrical Eng. & Systems 2019-08-29 Tong Zhang , Laurence H. Jackson , Alena Uus , James R. Clough , Lisa Story , Mary A. Rutherford , Joseph V. Hajnal , Maria Deprez

This article presents a novel undersampled magnetic resonance imaging (MRI) technique that leverages the concept of Neural Radiance Field (NeRF). With radial undersampling, the corresponding imaging problem can be reformulated into an image…

Image and Video Processing · Electrical Eng. & Systems 2024-03-05 Tae Jun Jang , Chang Min Hyun

Medical image super-resolution (MedSR) is essential for improving diagnostic precision across diverse imaging modalities such as MRI, CT, X-ray, Ultrasound, and Fundus imaging. Despite rapid advances in deep learning, challenges remain in…

Computer Vision and Pattern Recognition · Computer Science 2026-05-06 Subhash Gurappa , Trivikram Satharasi , Yashas Hariprasad , Sundararaj Sitharama Iyengar

High-resolution (HR) magnetic resonance imaging (MRI) is crucial for many clinical and research applications. However, achieving it remains costly and constrained by technical trade-offs and experimental limitations. Super-resolution (SR)…

Transfer learning has remarkably improved computer vision. These advances also promise improvements in neuroimaging, where training set sizes are often small. However, various difficulties arise in directly applying models pretrained on…

Image and Video Processing · Electrical Eng. & Systems 2023-03-03 Umang Gupta , Tamoghna Chattopadhyay , Nikhil Dhinagar , Paul M. Thompson , Greg Ver Steeg , The Alzheimer's Disease Neuroimaging Initiative

In recent years, deep convolutional neural networks (CNNs) have shown record-shattering performance in a variety of computer vision problems, such as visual object recognition, detection and segmentation. These methods have also been…

Computer Vision and Pattern Recognition · Computer Science 2019-07-30 Jose Bernal , Kaisar Kushibar , Daniel S. Asfaw , Sergi Valverde , Arnau Oliver , Robert Martí , Xavier Lladó

The human brain is a complex system requiring both macroscopic and microscopic components for comprehensive understanding. However, mapping nonlinear relationships between these scales remains challenging due to technical limitations and…

Image and Video Processing · Electrical Eng. & Systems 2025-10-28 Sooyoung Kim , Joonwoo Kwon , Junbeom Kwon , Jungyoun Janice Min , Sangyoon Bae , Yuewei Lin , Shinjae Yoo , Jiook Cha

Magnetic resonance imaging (MRI) is a vital clinical diagnostic tool, yet its application is limited by prolonged scan times. Accelerating MRI reconstruction addresses this issue by reconstructing high-fidelity MR images from undersampled…

Computer Vision and Pattern Recognition · Computer Science 2025-11-10 Jingran Xu , Yuanyuan Liu , Yuanbiao Yang , Zhuo-Xu Cui , Jing Cheng , Qingyong Zhu , Nannan Zhang , Yihang Zhou , Dong Liang , Yanjie Zhu

Accelerated magnetic resonance (MR) scan acquisition with compressed sensing (CS) and parallel imaging is a powerful method to reduce MR imaging scan time. However, many reconstruction algorithms have high computational costs. To address…

Computer Vision and Pattern Recognition · Computer Science 2018-04-03 Dongwook Lee , Jaejun Yoo , Sungho Tak , Jong Chul Ye

This paper aims to solve a fundamental problem in intensity-based 2D/3D registration, which concerns the limited capture range and need for very good initialization of state-of-the-art image registration methods. We propose a regression…

Computer Vision and Pattern Recognition · Computer Science 2017-03-07 Benjamin Hou , Amir Alansary , Steven McDonagh , Alice Davidson , Mary Rutherford , Jo V. Hajnal , Daniel Rueckert , Ben Glocker , Bernhard Kainz

Deep learning has become a valuable tool for the automation of certain medical image segmentation tasks, significantly relieving the workload of medical specialists. Some of these tasks require segmentation to be performed on a subset of…

Image and Video Processing · Electrical Eng. & Systems 2024-02-06 José Morano , Guilherme Aresta , Dmitrii Lachinov , Julia Mai , Ursula Schmidt-Erfurth , Hrvoje Bogunović

Image interpolation in medical area is of high importance as most 3D biomedical volume images are sampled where the distance between consecutive slices significantly greater than the in-plane pixel size due to radiation dose or scanning…

Image and Video Processing · Electrical Eng. & Systems 2020-06-09 Jiawei Li , Jae Chul Koh , Won-Sook Lee

Magnetic resonance imaging (MRI) is crucial in diagnosing various abdominal conditions and anomalies. Traditional MRI scans often yield anisotropic data due to technical constraints, resulting in varying resolutions across spatial…

Image and Video Processing · Electrical Eng. & Systems 2025-04-01 Rotem Benisty , Yevgenia Shteynman , Moshe Porat , Anat Ilivitzki , Moti Freiman

Quantification of cardiac biomarkers from cine cardiovascular magnetic resonance (CMR) data using deep learning (DL) methods offers many advantages, such as increased accuracy and faster analysis. However, only a few studies have focused on…

Quantitative Methods · Quantitative Biology 2024-08-22 Dewmini Hasara Wickremasinghe , Yiyang Xu , Esther Puyol-Antón , Paul Aljabar , Reza Razavi , Andrew P. King

Functional Magnetic Resonance Imaging (fMRI) is vital in neuroscience, enabling investigations into brain disorders, treatment monitoring, and brain function mapping. However, head motion during fMRI scans, occurring between shots of slice…

Computer Vision and Pattern Recognition · Computer Science 2024-04-09 Samah Khawaled , Simon K. Warfield , Moti Freiman

Retrospective analysis of brain MRI scans acquired in the clinic has the potential to enable neuroimaging studies with sample sizes much larger than those found in research datasets. However, analysing such clinical images "in the wild" is…

Image and Video Processing · Electrical Eng. & Systems 2023-01-06 Benjamin Billot , Magdamo Colin , Sean E. Arnold , Sudeshna Das , Juan. E. Iglesias

Magnetic Resonance Imaging (MRI) is important in clinic to produce high resolution images for diagnosis, but its acquisition time is long for high resolution images. Deep learning based MRI super resolution methods can reduce scan time…

Image and Video Processing · Electrical Eng. & Systems 2022-09-08 Ziyan Lin , Zihao Chen

Rotating-view thick-slice acquisition is highly SNR-efficient for mesoscale diffusion MRI (dMRI) but requires numerous rotating views to satisfy Nyquist sampling, resulting in long scan time. We propose a self-supervised Spatial-Angular…

Computer Vision and Pattern Recognition · Computer Science 2026-05-05 Yinzhe Wu , Hongyu Rui , Fanwen Wang , Jiahao Huang , Zi Wang , Guang Yang