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Lesion segmentation is a core task for quantitative analysis of MRI scans of Multiple Sclerosis patients. The recent success of deep learning techniques in a variety of medical image analysis applications has renewed community interest in…

Image and Video Processing · Electrical Eng. & Systems 2020-12-29 Huahong Zhang , Ipek Oguz

Deep convolutional neural networks (CNNs) are state-of-the-art for semantic image segmentation, but typically require many labeled training samples. Obtaining 3D segmentations of medical images for supervised training is difficult and labor…

Computer Vision and Pattern Recognition · Computer Science 2019-07-29 Zhenlin Xu , Marc Niethammer

We develop a deep learning model, ABioSPATH, to predict the one-year risk of ischemic stroke (IS) in atrial fibrillation (AF) patients. The model integrates drug-protein-disease pathways and real-world clinical data of AF patients to…

Quantitative Methods · Quantitative Biology 2024-08-27 Zhiheng Lyu , Jiannan Yang , Zhongzhi Xu , Weilan Wang , Weibin Cheng , Kwok-Leung Tsui , Gary Tse , Qingpeng Zhang

Automated segmentation of medical imaging is of broad interest to clinicians and machine learning researchers alike. The goal of segmentation is to increase efficiency and simplicity of visualization and quantification of regions of…

Image and Video Processing · Electrical Eng. & Systems 2020-06-04 Shruti Jadon , Owen P. Leary , Ian Pan , Tyler J. Harder , David W. Wright , Lisa H. Merck , Derek L. Merck

Stroke is a common disabling neurological condition that affects about one-quarter of the adult population over age 25; more than half of patients still have poor outcomes, such as permanent functional dependence or even death, after the…

Computer Vision and Pattern Recognition · Computer Science 2024-02-19 Chia-Ling Tsai , Hui-Yun Su , Shen-Feng Sung , Wei-Yang Lin , Ying-Ying Su , Tzu-Hsien Yang , Man-Lin Mai

Convolutional Neural Networks (CNNs) have shown remarkable progress in medical image segmentation. However, lesion segmentation remains a challenge to state-of-the-art CNN-based algorithms due to the variance in scales and shapes. On the…

Image and Video Processing · Electrical Eng. & Systems 2023-05-31 Yanwen Li , Luyang Luo , Huangjing Lin , Pheng-Ann Heng , Hao Chen

Intracerebral hemorrhage (ICH) is the most fatal subtype of stroke and is characterized by a high incidence of disability. Accurate segmentation of the ICH region and prognosis prediction are critically important for developing and refining…

Computer Vision and Pattern Recognition · Computer Science 2024-11-08 Xinlei Yu , Ahmed Elazab , Ruiquan Ge , Hui Jin , Xinchen Jiang , Gangyong Jia , Qing Wu , Qinglei Shi , Changmiao Wang

Finding small lesions is very challenging due to lack of noticeable features, severe class imbalance, as well as the size itself. One approach to improve small lesion segmentation is to reduce the region of interest and inspect it at a…

Image and Video Processing · Electrical Eng. & Systems 2022-08-01 Seung Yeon Shin , Thomas C. Shen , Stephen A. Wank , Ronald M. Summers

Recent progress in automated PET/CT lesion segmentation using deep learning methods has demonstrated the feasibility of this task. However, tumor lesion detection and segmentation in whole-body PET/CT is still a chal-lenging task. To…

Image and Video Processing · Electrical Eng. & Systems 2023-02-27 Satoshi Kondo , Satoshi Kasai

Towards automated retinal screening, this paper makes an endeavor to simultaneously achieve pixel-level retinal lesion segmentation and image-level disease classification. Such a multi-task approach is crucial for accurate and clinically…

Computer Vision and Pattern Recognition · Computer Science 2020-10-20 Qijie Wei , Xirong Li , Weihong Yu , Xiao Zhang , Yongpeng Zhang , Bojie Hu , Bin Mo , Di Gong , Ning Chen , Dayong Ding , Youxin Chen

Purpose: To enable fast and reliable assessment of subcutaneous and visceral adipose tissue compartments derived from whole-body MRI. Methods: Quantification and localization of different adipose tissue compartments from whole-body MR…

The scarcity of labeled data often impedes the application of deep learning to the segmentation of medical images. Semi-supervised learning seeks to overcome this limitation by exploiting unlabeled examples in the learning process. In this…

Computer Vision and Pattern Recognition · Computer Science 2021-06-25 Jizong Peng , Marco Pedersoli , Christian Desrosiers

Stroke is the second most common cause of death in developed countries, where rapid clinical intervention can have a major impact on a patient's life. To perform the revascularization procedure, the decision making of physicians considers…

Computer Vision and Pattern Recognition · Computer Science 2018-09-25 Adriano Pinto , Sergio Pereira , Raphael Meier , Victor Alves , Roland Wiest , Carlos A. Silva , Mauricio Reyes

Introduction: Multiple Sclerosis (MS) is a chronic disease that affects millions of people across the globe. MS can critically affect different organs of the central nervous system such as the eyes, the spinal cord, and the brain.…

Image and Video Processing · Electrical Eng. & Systems 2023-02-21 Atif Shah , Maged S. Al-Shaibani , Moataz Ahmad , Reem Bunyan

This paper explores the use of a soft ground-truth mask ("soft mask'') to train a Fully Convolutional Neural Network (FCNN) for segmentation of Multiple Sclerosis (MS) lesions. Detection and segmentation of MS lesions is a complex task…

Computer Vision and Pattern Recognition · Computer Science 2019-01-29 Eytan Kats , Jacob Goldberger , Hayit Greenspan

X-ray digital subtraction angiography (DSA) is frequently used when evaluating minimally invasive medical interventions. DSA predominantly visualizes vessels, and soft tissue anatomy is less visible or invisible in DSA. Visualization of…

Computer vision models can be used to assist during mechanical thrombectomy (MT) for acute ischemic stroke (AIS), but poor image quality often degrades performance. This work presents CLAIRE-DSA, a deep learning--based framework designed to…

Skin lesions segmentation is an important step in the process of automated diagnosis of the skin melanoma. However, the accuracy of segmenting melanomas skin lesions is quite a challenging task due to less data for training, irregular…

Image and Video Processing · Electrical Eng. & Systems 2020-12-29 Sabari Nathan , Priya Kansal

Identifying individual tissues, so-called tissue segmentation, in diabetic foot ulcer (DFU) images is a challenging task and little work has been published, largely due to the limited availability of a clinical image dataset. To address…

Image and Video Processing · Electrical Eng. & Systems 2024-06-25 Mrinal Kanti Dhar , Chuanbo Wang , Yash Patel , Taiyu Zhang , Jeffrey Niezgoda , Sandeep Gopalakrishnan , Keke Chen , Zeyun Yu

Deep learning (DL) techniques have emerged as promising solutions for medical wound tissue segmentation. However, a notable limitation in this field is the lack of publicly available labelled datasets and a standardised performance…

Image and Video Processing · Electrical Eng. & Systems 2025-02-18 Muhammad Ashad Kabir , Nidita Roy , Md. Ekramul Hossain , Jill Featherston , Sayed Ahmed