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While large language models (LLMs) excel at static scientific reasoning, they struggle to model the temporal structure of dynamic physical processes. We present EvoMD-LLM (Evolutionary Molecular Dynamics Large Language Model), a framework…

Artificial Intelligence · Computer Science 2026-05-29 Zhichen Tang , Zhengzheng Dang , Yulin Chen , Jixin Wu , Haiwen Li , Yanming Wang

One fundamental problem in temporal graph analysis is to count the occurrences of small connected subgraph patterns (i.e., motifs), which benefits a broad range of real-world applications, such as anomaly detection, structure prediction,…

Machine Learning · Computer Science 2022-04-21 Zhongqiang Gao , Chuanqi Cheng , Yanwei Yu , Lei Cao , Chao Huang , Junyu Dong

Deep neural network (DNN) models have recently obtained state-of-the-art prediction accuracy for the transcription factor binding (TFBS) site classification task. However, it remains unclear how these approaches identify meaningful DNA…

Machine Learning · Computer Science 2016-10-20 Jack Lanchantin , Ritambhara Singh , Beilun Wang , Yanjun Qi

Multimodal foundation models (MFMs) have demonstrated significant success in tasks such as visual captioning, question answering, and image-text retrieval. However, these models face inherent limitations due to their finite internal…

Computer Vision and Pattern Recognition · Computer Science 2025-02-11 Xingjian Diao , Chunhui Zhang , Weiyi Wu , Zhongyu Ouyang , Peijun Qing , Ming Cheng , Soroush Vosoughi , Jiang Gui

Investigating the frequency and distribution of small subgraphs with a few nodes/edges, i.e., motifs, is an effective analysis method for static networks. Motif-driven analysis is also useful for temporal networks where the spectrum of…

Social and Information Networks · Computer Science 2021-05-04 Penghang Liu , Valerio Guarrasi , A. Erdem Sarıyüce

Temporal grounding is the task of locating a specific segment from an untrimmed video according to a query sentence. This task has achieved significant momentum in the computer vision community as it enables activity grounding beyond…

Computer Vision and Pattern Recognition · Computer Science 2023-05-16 Juncheng Li , Siliang Tang , Linchao Zhu , Wenqiao Zhang , Yi Yang , Tat-Seng Chua , Fei Wu , Yueting Zhuang

Inspired by the success of vision-language methods (VLMs) in zero-shot classification, recent works attempt to extend this line of work into object detection by leveraging the localization ability of pre-trained VLMs and generating pseudo…

Computer Vision and Pattern Recognition · Computer Science 2023-08-01 Yanxin Long , Jianhua Han , Runhui Huang , Xu Hang , Yi Zhu , Chunjing Xu , Xiaodan Liang

Search behaviour is characterised using synonymy and polysemy as users often want to search information based on meaning. Semantic representation strategies represent a move towards richer associative connections that can adequately capture…

Information Retrieval · Computer Science 2026-02-06 Niall McCarroll , Kevin Curran , Eugene McNamee , Angela Clist , Andrew Brammer

Self-supervised learning in vision-language processing exploits semantic alignment between imaging and text modalities. Prior work in biomedical VLP has mostly relied on the alignment of single image and report pairs even though clinical…

From traffic flows on road networks to electrical signals in brain networks, many real-world networks contain modular structures of different sizes and densities. In the networks where modular structures emerge due to coupling between nodes…

Physics and Society · Physics 2022-11-09 Daniel Edler , Jelena Smiljanić , Anton Holmgren , Alexandre Antonelli , Martin Rosvall

Vision-language models (VLMs) such as CLIP exhibit strong Out-of-distribution (OOD) detection capabilities by aligning visual and textual representations. Recent CLIP-based test-time adaptation methods further improve detection performance…

Computation and Language · Computer Science 2026-04-20 Jinlun Ye , Jiang Liao , Runhe Lai , Xinhua Lu , Jiaxin Zhuang , Zhiyong Gan , Ruixuan Wang

Recent multi-modal contrastive learning models have demonstrated the ability to learn an embedding space suitable for building strong vision classifiers, by leveraging the rich information in large-scale image-caption datasets. Our work…

Machine Learning · Computer Science 2023-02-09 Yuhui Zhang , Jeff Z. HaoChen , Shih-Cheng Huang , Kuan-Chieh Wang , James Zou , Serena Yeung

Extracting coherent patterns is one of the standard approaches towards understanding spatio-temporal data. Dynamic mode decomposition (DMD) is a powerful tool for extracting coherent patterns, but the original DMD and most of its variants…

Machine Learning · Computer Science 2021-02-22 Naoya Takeishi , Keisuke Fujii , Koh Takeuchi , Yoshinobu Kawahara

Network community detection is a hot research topic in network analysis. Although many methods have been proposed for community detection, most of them only take into consideration the lower-order structure of the network at the level of…

Social and Information Networks · Computer Science 2019-06-12 Pei-Zhen Li , Ling Huang , Chang-Dong Wang , Jian-Huang Lai

We address the problem of video moment localization with natural language, i.e. localizing a video segment described by a natural language sentence. While most prior work focuses on grounding the query as a whole, temporal dependencies and…

Multimedia · Computer Science 2019-08-13 Songyang Zhang , Jinsong Su , Jiebo Luo

Individual's general well-being is greatly impacted by mental health conditions including depression and Post-Traumatic Stress Disorder (PTSD), underscoring the importance of early detection and precise diagnosis in order to facilitate…

Machine Learning · Computer Science 2025-02-07 Himanshi Singh , Sadhana Tiwari , Sonali Agarwal , Ritesh Chandra , Sanjay Kumar Sonbhadra , Vrijendra Singh

Deep learning models have enjoyed great success for image related computer vision tasks like image classification and object detection. For video related tasks like human action recognition, however, the advancements are not as significant…

Computer Vision and Pattern Recognition · Computer Science 2018-09-12 Xiaolin Song , Cuiling Lan , Wenjun Zeng , Junliang Xing , Jingyu Yang , Xiaoyan Sun

This paper introduces a novel approach for jointly solving the periodic Train Timetabling Problem (TTP), train routing, and Vehicle Circulation Problem (VCP) through a unified optimization model. While these planning stages are…

Optimization and Control · Mathematics 2025-07-16 Florian Fuchs , Bernardo Martin-Iradi , Francesco Corman

For the advancements of time series classification, scrutinizing previous studies, most existing methods adopt a common learning-to-classify paradigm - a time series classifier model tries to learn the relation between sequence inputs and…

Machine Learning · Computer Science 2024-03-20 Mingyue Cheng , Yiheng Chen , Qi Liu , Zhiding Liu , Yucong Luo

Audio-Visual Segmentation (AVS) aims to precisely outline audible objects in a visual scene at the pixel level. Existing AVS methods require fine-grained annotations of audio-mask pairs in supervised learning fashion. This limits their…

Computer Vision and Pattern Recognition · Computer Science 2023-09-14 Swapnil Bhosale , Haosen Yang , Diptesh Kanojia , Xiatian Zhu