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Related papers: Text Summarization in the Biomedical Domain

200 papers

Keeping track of translational research is essential to evaluating the performance of programs on translational medicine. Despite several indicators in previous studies, a consensus measure is still needed to represent the translational…

Digital Libraries · Computer Science 2022-11-24 Xin Li , Xuli Tang , Wei Lu

A key problem in text summarization is finding a salience function which determines what information in the source should be included in the summary. This paper describes the use of machine learning on a training corpus of documents and…

Computation and Language · Computer Science 2007-05-23 Inderjeet Mani , Eric Bloedorn

Information overload is a prevalent challenge in many high-value domains. A prominent case in point is the explosion of the biomedical literature on COVID-19, which swelled to hundreds of thousands of papers in a matter of months. In…

Large language models (LLMs) have emerged as powerful tools with transformative potential across numerous domains, including healthcare and medicine. In the medical domain, LLMs hold promise for tasks ranging from clinical decision support…

Computation and Language · Computer Science 2024-05-14 Xiaolan Chen , Jiayang Xiang , Shanfu Lu , Yexin Liu , Mingguang He , Danli Shi

While there has been recent progress in abstractive summarization as applied to different domains including news articles, scientific articles, and blog posts, the application of these techniques to clinical text summarization has been…

Computation and Language · Computer Science 2022-04-05 Amanuel Alambo , Tanvi Banerjee , Krishnaprasad Thirunarayan , Mia Cajita

Automatically summarizing radiology reports into a concise impression can reduce the manual burden of clinicians and improve the consistency of reporting. Previous work aimed to enhance content selection and factuality through guided…

Computation and Language · Computer Science 2023-07-25 Jan Trienes , Paul Youssef , Jörg Schlötterer , Christin Seifert

Automated text simplification aims to produce simple versions of complex texts. This task is especially useful in the medical domain, where the latest medical findings are typically communicated via complex and technical articles. This…

Computation and Language · Computer Science 2023-10-19 Sebastian Joseph , Kathryn Kazanas , Keziah Reina , Vishnesh J. Ramanathan , Wei Xu , Byron C. Wallace , Junyi Jessy Li

Clinical Decision Support Systems (CDSS) form an important area of research. In spite of its importance, it is difficult for researchers to evaluate the domain primarily because of a considerable spread of relevant literature in…

Digital Libraries · Computer Science 2017-09-01 Kamran Farooq , Bisma S Khan , Muaz A Niazi , Stephen J Leslie , Amir Hussain

Visual text, a pivotal element in both document and scene images, speaks volumes and attracts significant attention in the computer vision domain. Beyond visual text detection and recognition, the field of visual text processing has…

Computer Vision and Pattern Recognition · Computer Science 2024-02-06 Yan Shu , Weichao Zeng , Zhenhang Li , Fangmin Zhao , Yu Zhou

With the advancement of telemedicine, both researchers and medical practitioners are working hand-in-hand to develop various techniques to automate various medical operations, such as diagnosis report generation. In this paper, we first…

Computation and Language · Computer Science 2023-09-28 Abhisek Tiwari , Anisha Saha , Sriparna Saha , Pushpak Bhattacharyya , Minakshi Dhar

This paper presents the setup and results of the second edition of the BioLaySumm shared task on the Lay Summarisation of Biomedical Research Articles, hosted at the BioNLP Workshop at ACL 2024. In this task edition, we aim to build on the…

Computation and Language · Computer Science 2024-08-19 Tomas Goldsack , Carolina Scarton , Matthew Shardlow , Chenghua Lin

Within the text analysis and processing fields, generated text attacks have been made easier to create than ever before. To combat these attacks open sourcing models and datasets have become a major trend to create automated detection…

Computation and Language · Computer Science 2022-10-13 Jesus Guerrero , Izzat Alsmadi

Ever-expanding volumes of biomedical text require automated semantic annotation techniques to curate and put to best use. An established field of research seeks to link mentions in text to knowledge bases such as those included in the UMLS…

Artificial Intelligence · Computer Science 2018-11-13 Genevieve Gorrell , Xingyi Song , Angus Roberts

We are developing an automatic method to compile an encyclopedic corpus from the Web. In our previous work, paragraph-style descriptions for a term are extracted from Web pages and organized based on domains. However, these descriptions are…

Computation and Language · Computer Science 2007-05-23 Atsushi Fujii , Tetsuya Ishikawa

Text summarization is the process of condensing a piece of text to fewer sentences, while still preserving its content. Chat transcript, in this context, is a textual copy of a digital or online conversation between a customer (caller) and…

Computation and Language · Computer Science 2024-10-14 Pratik K. Biswas

Abstractive dialogue summarization is the task of distilling conversations into informative and concise summaries. Although reviews have been conducted on this topic, there is a lack of comprehensive work detailing the challenges of…

Computation and Language · Computer Science 2025-04-25 Frederic Kirstein , Jan Philip Wahle , Bela Gipp , Terry Ruas

The rapid increase in unstructured data across various fields has made multi-document comprehension and summarization a critical task. Traditional approaches often fail to capture relevant context, maintain logical consistency, and extract…

Computation and Language · Computer Science 2024-09-30 Aditi Godbole , Jabin Geevarghese George , Smita Shandilya

In this paper we describe a biography summarization system using sentence classification and ideas from information retrieval. Although the individual techniques are not new, assembling and applying them to generate multi-document…

Computation and Language · Computer Science 2007-05-23 Liang Zhou , Miruna Ticrea , Eduard Hovy

Automatic Text Summarization strategies have been successfully employed to digest text collections and extract its essential content. Usually, summaries are generated using textual corpora that belongs to the same domain area where the…

Computation and Language · Computer Science 2018-07-03 Vinicius Woloszyn , Guilherme Medeiros Machado , Leandro Krug Wives , José Palazzo Moreira de Oliveira

Recent advances in large language models (LLMs) have made significant progress across multiple biomedical tasks, including biomedical question answering, lay-language summarization of the biomedical literature, and clinical note…

Information Retrieval · Computer Science 2026-03-24 Deepak Gupta , Dina Demner-Fushman , William Hersh , Steven Bedrick , Kirk Roberts