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ArchNEMESIS is an open-source Python package developed for the analysis of remote sensing spectroscopic observations of planetary atmospheres. It is based on the widely used NEMESIS radiative transfer and retrieval tool, which has been…

Instrumentation and Methods for Astrophysics · Physics 2025-07-29 Juan Alday , Joseph Penn , Patrick G. J. Irwin , Jonathon P. Mason , Jingxuan Yang

This is a companion Focus Demonstration article to the PyMUSE python package, demonstrating its usage and utilities for VLT/MUSE data analysis, that include a wide range of options for spectra extractions, the creation of different types of…

Instrumentation and Methods for Astrophysics · Physics 2018-03-20 Ismael Pessa , Nicolas Tejos , Cristobal Moya

Deep astronomical images are often constructed by digitially stacking many individual sub-exposures. Each sub-exposure is expected to show small differences in the positions of stars and other objects in the field, due to the movement of…

Instrumentation and Methods for Astrophysics · Physics 2025-05-22 Carter Lee Rhea , Pieter Van Dokkum , Steven R. Janssens , Imad Pasha , Roberto Abraham , William P Bowman , Deborah Lokhorst , Seery Chen

FCMpy is an open source package in Python for building and analyzing Fuzzy Cognitive Maps. More specifically, the package allows 1) deriving fuzzy causal weights from qualitative data, 2) simulating the system behavior, 3) applying machine…

Mathematical Software · Computer Science 2022-11-03 Samvel Mkhitaryan , Philippe J. Giabbanelli , Maciej K. Wozniak , Gonzalo Napoles , Nanne K. de Vries , Rik Crutzen

The use of Python is noticeably growing among the scientific community, and Astronomy is not an exception. The power of Python consists of being an extremely versatile high-level language, easy to program that combines both traditional…

Instrumentation and Methods for Astrophysics · Physics 2018-07-16 Daniel M. Faes

The analysis of experimental results with Python often requires writing many code scripts which all need access to the same set of functions. In a common field of research, this set will be nearly the same for many users. The qspec Python…

Computational Physics · Physics 2025-03-18 Patrick Müller , Wilfried Nörtershäuser

Real-world networks, with their evolving relations, are best captured as temporal graphs. However, existing software libraries are largely designed for static graphs where the dynamic nature of temporal graphs is ignored. Bridging this gap,…

Social and Information Networks · Computer Science 2024-02-07 Razieh Shirzadkhani , Shenyang Huang , Elahe Kooshafar , Reihaneh Rabbany , Farimah Poursafaei

FinInG is a package for computation in Finite Incidence Geometry. It provides users with the basic tools to work in various areas of finite geometry from the realms of projective spaces to the flat lands of generalised polygons. The…

Combinatorics · Mathematics 2016-06-20 John Bamberg , Anton Betten , Philippe Cara , Jan De Beule , Max Neunhöffer , Michel Lavrauw

`scores` is a Python package containing mathematical functions for the verification, evaluation and optimisation of forecasts, predictions or models. It supports labelled n-dimensional (multidimensional) data, which is used in many…

HyperNetX (HNX) is an open source Python library for the analysis and visualization of complex network data modeled as hypergraphs. Initially released in 2019, HNX facilitates exploratory data analysis of complex networks using algebraic…

Mathematical Software · Computer Science 2023-10-19 Brenda Praggastis , Sinan Aksoy , Dustin Arendt , Mark Bonicillo , Cliff Joslyn , Emilie Purvine , Madelyn Shapiro , Ji Young Yun

Quadratic hypersurfaces are a natural generalization of affine subspaces, and projections are elementary blocks of algorithms in optimization and machine learning. It is therefore intriguing that no proper studies and tools have been…

Optimization and Control · Mathematics 2022-11-02 Loïc Van Hoorebeeck , P. -A. Absil

This paper introduces pycvxset, a new Python package to manipulate and visualize convex sets. We support polytopes and ellipsoids, and provide user-friendly methods to perform a variety of set operations. For polytopes, pycvxset supports…

Systems and Control · Electrical Eng. & Systems 2024-10-16 Abraham P. Vinod

pyspeckit is a toolkit and library for spectroscopic analysis in Python. We describe the pyspeckit package and highlight some of its capabilities, such as interactively fitting a model to data, akin to the historically widely-used splot…

Instrumentation and Methods for Astrophysics · Physics 2022-06-01 Adam Ginsburg , Vlas Sokolov , Miguel de Val-Borro , Erik Rosolowsky , Jaime E. Pineda , Brigitta M. Sipőcz , Jonathan D. Henshaw

The open-source PyNX toolkit [Favre-Nicolin et al (2011) arXiv:1010.2641, Mandula et al (2016)] has been extended to provide tools for coherent X-ray imaging data analysis and simulation. All calculations can be executed on graphical…

A common task in astronomical research is to estimate the physical parameters (temperature, mass, density etc.) of a gas by using observed line emission. This often requires a calculation of how the radiation propagates via emission and…

Instrumentation and Methods for Astrophysics · Physics 2026-03-03 Gianni Cataldi

bayesian_pyhf is a Python package that allows for the parallel Bayesian and frequentist evaluation of multi-channel binned statistical models. The Python library pyhf is used to build such models according to the HistFactory framework and…

Computation · Statistics 2023-12-13 Matthew Feickert , Lukas Heinrich , Malin Horstmann

Automated debugging, long pursued in a variety of fields from software engineering to cybersecurity, requires a framework that offers the building blocks for a programmable debugging workflow. However, existing debuggers are primarily…

Software Engineering · Computer Science 2025-06-06 Gabriele Digregorio , Roberto Alessandro Bertolini , Francesco Panebianco , Mario Polino

We present here the first release of the open-source python package ExoTETHyS, which aims to provide a stand-alone set of tools for modeling spectro-photometric observations of the transiting exoplanets. In particular, we describe: (1) a…

Earth and Planetary Astrophysics · Physics 2020-02-05 Giuseppe Morello , Antonio Claret , Marine Martin-Lagarde , Christophe Cossou , Angelos Tsiaras , Pierre-Olivier Lagage

Neural simulation-based inference (SBI) describes an emerging family of methods for Bayesian inference with intractable likelihood functions that use neural networks as surrogate models. Here we introduce sbijax, a Python package that…

Machine Learning · Computer Science 2026-03-23 Simon Dirmeier , Antonietta Mira , Carlo Albert