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In modern computer vision, images are typically represented as a fixed uniform grid with some stride and processed via a deep convolutional neural network. We argue that deforming the grid to better align with the high-frequency image…

Computer Vision and Pattern Recognition · Computer Science 2023-04-05 Jun Gao , Zian Wang , Jinchen Xuan , Sanja Fidler

In this study, we tackle the challenging task of predicting secondary structures from protein primary sequences, a pivotal initial stride towards predicting tertiary structures, while yielding crucial insights into protein activity,…

Machine Learning · Computer Science 2025-11-18 Disha Varshney , Samarth Garg , Sarthak Tyagi , Deeksha Varshney , Nayan Deep , Asif Ekbal

Universal transformers (UTs) have been widely used for complex reasoning tasks such as ARC-AGI and Sudoku, yet the specific sources of their performance gains remain underexplored. In this work, we systematically analyze UTs variants and…

Artificial Intelligence · Computer Science 2025-12-29 Zitian Gao , Lynx Chen , Yihao Xiao , He Xing , Ran Tao , Haoming Luo , Joey Zhou , Bryan Dai

We report a flexible language-model based deep learning strategy, applied here to solve complex forward and inverse problems in protein modeling, based on an attention neural network that integrates transformer and graph convolutional…

Biomolecules · Quantitative Biology 2023-10-20 Markus J. Buehler

This paper introduces a tensor neural network (TNN) to address nonparametric regression problems, leveraging its distinct sub-network structure to effectively facilitate variable separation and enhance the approximation of complex,…

Machine Learning · Statistics 2024-09-16 Yongxin Li , Yifan Wang , Zhongshuo Lin , Hehu Xie

Recently, the superior performance of Transformers has made them a more robust and scalable solution for sequence modeling than traditional recurrent neural networks (RNNs). However, the effectiveness of Transformer in capturing long-term…

Machine Learning · Computer Science 2025-05-07 Zhou Wu , Junyi An , Baile Xu , Furao Shen , Jian Zhao

Invertible neural networks (INNs) are neural network architectures with invertibility by design. Thanks to their invertibility and the tractability of Jacobian, INNs have various machine learning applications such as probabilistic modeling,…

Machine Learning · Computer Science 2022-04-18 Isao Ishikawa , Takeshi Teshima , Koichi Tojo , Kenta Oono , Masahiro Ikeda , Masashi Sugiyama

The study of deep neural networks (DNNs) in the infinite-width limit, via the so-called neural tangent kernel (NTK) approach, has provided new insights into the dynamics of learning, generalization, and the impact of initialization. One key…

Machine Learning · Computer Science 2021-06-16 Sina Alemohammad , Zichao Wang , Randall Balestriero , Richard Baraniuk

Training recurrent neural networks (RNNs) is a hard problem due to degeneracies in the optimization landscape, a problem also known as vanishing/exploding gradients. Short of designing new RNN architectures, previous methods for dealing…

Neural and Evolutionary Computing · Computer Science 2020-02-11 A. Emin Orhan , Xaq Pitkow

Deep graph neural networks (GNNs) have achieved excellent results on various tasks on increasingly large graph datasets with millions of nodes and edges. However, memory complexity has become a major obstacle when training deep GNNs for…

Machine Learning · Computer Science 2022-04-12 Guohao Li , Matthias Müller , Bernard Ghanem , Vladlen Koltun

In this paper, we propose Graph Retention Networks (GRNs) as a unified architecture for deep learning on dynamic graphs. The GRN extends the concept of retention into dynamic graph data as graph retention, equipping the model with three key…

Machine Learning · Computer Science 2026-04-14 Qian Chang , Xia Li , Xiufeng Cheng , Runsong Jia , Jinqing Yang , Guoping Hu , Ciprian Doru Giurcaneanu

Graph Neural Networks (GNNs) have emerged as a prominent research topic in the field of machine learning. Existing GNN models are commonly categorized into two types: spectral GNNs, which are designed based on polynomial graph filters, and…

Machine Learning · Computer Science 2023-09-01 Guanyu Cui , Zhewei Wei

The integration of Graph Neural Networks (GNNs) and Neural Ordinary and Partial Differential Equations has been extensively studied in recent years. GNN architectures powered by neural differential equations allow us to reason about their…

Machine Learning · Computer Science 2024-06-18 Moshe Eliasof , Eldad Haber , Eran Treister

Convolutional neural network (CNN) and recurrent neural network (RNN) models have become the mainstream methods for relation classification. We propose a unified architecture, which exploits the advantages of CNN and RNN simultaneously, to…

Computation and Language · Computer Science 2018-07-31 Bin He , Yi Guan , Rui Dai

Non-Euclidean constraints are inherent in many kinds of data in computer vision and machine learning, typically as a result of specific invariance requirements that need to be respected during high-level inference. Often, these geometric…

Computer Vision and Pattern Recognition · Computer Science 2017-09-26 Suhas Lohit , Pavan Turaga

In this work recent advances in conditional adversarial networks are investigated to develop an end-to-end architecture based on Convolutional Neural Networks (CNNs) to directly map realistic colours to an input greyscale image. Observing…

Image and Video Processing · Electrical Eng. & Systems 2019-09-06 Marc Górriz , Marta Mrak , Alan F. Smeaton , Noel E. O'Connor

We propose a novel class of neural network-like parametrized functions, i.e., general transformation neural networks (GTNNs), for high-dimensional approximation. Conventional deep neural networks sometimes perform less accurately on…

Numerical Analysis · Mathematics 2026-02-25 Xiaoyang Wang , Yiqi Gu

The simulation of complex physical systems using a discretized mesh is a cornerstone of applied mechanics, but traditional numerical solvers are often computationally prohibitive for many-query tasks. While Graph Neural Networks (GNNs) have…

Machine Learning · Computer Science 2025-09-24 Kangzheng Liu , Leixin Ma

Graph neural networks (GNNs) are widely used as surrogates for costly experiments and first-principles simulations to study the behavior of compounds at atomistic scale, and their architectural complexity is constantly increasing to enable…

Machine Learning · Computer Science 2026-05-04 Arindam Chowdhury , Massimiliano Lupo Pasini

Convolutional Neural Networks (CNN) have been successful in processing data signals that are uniformly sampled in the spatial domain (e.g., images). However, most data signals do not natively exist on a grid, and in the process of being…

Computer Vision and Pattern Recognition · Computer Science 2019-01-09 Chiyu "Max" Jiang , Dequan Wang , Jingwei Huang , Philip Marcus , Matthias Nießner
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