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Segmentation of blood vessels in murine cerebral 3D OCTA images is foundational for in vivo quantitative analysis of the effects of neurovascular disorders, such as stroke or Alzheimer's, on the vascular network. However, to accurately…

Image and Video Processing · Electrical Eng. & Systems 2024-03-13 Bastian Wittmann , Lukas Glandorf , Johannes C. Paetzold , Tamaz Amiranashvili , Thomas Wälchli , Daniel Razansky , Bjoern Menze

Diffuse correlation spectroscopy (DCS) analyzes the autocorrelation function of photons scattered by red blood cells, enabling non-invasive, continuous measurement of deep tissue blood flow at the bedside. Multi-layer DCS models (two- and…

Cerebral small vessel disease (CSVD) is a major vascular contributor to cognitive impairment in ageing, including dementias. Imaging remains the most promising method for in vivo studies of CSVD. To replace the subjective and laborious…

Image and Video Processing · Electrical Eng. & Systems 2022-04-05 Jiyang Jiang , Dadong Wang , Yang Song , Perminder S. Sachdev , Wei Wen

Cytoarchitectonic parcellations of the human brain serve as anatomical references in multimodal atlas frameworks. They are based on analysis of cell-body stained histological sections and the identification of borders between brain areas.…

Computer Vision and Pattern Recognition · Computer Science 2023-06-06 Hannah Spitzer , Kai Kiwitz , Katrin Amunts , Stefan Harmeling , Timo Dickscheid

The reciprocal impact of applied neuroscience and cognitive studies on humanities has been extensive and growing over the past 30 years of research. Studies on neuroaesthetics have provided novel insights in visual arts, music as well as…

Neurons and Cognition · Quantitative Biology 2019-04-16 Ali-Mohammad Kamali , Mohammad Taghi Najafi , Mohammad Nami

Generating computational anatomical models of cerebrovascular networks is vital for improving clinical practice and understanding brain oxygen transport. This is achieved by extracting graph-based representations based on pre-mapping of…

Quantitative Methods · Quantitative Biology 2019-12-23 Rafat Damseh , Patrick Delafontaine-Martel , Philippe Pouliot , Farida Cheriet , Frederic Lesage

The retinal vasculature provides important clues in the diagnosis and monitoring of systemic diseases including hypertension and diabetes. The microvascular system is of primary involvement in such conditions, and the retina is the only…

Image and Video Processing · Electrical Eng. & Systems 2022-03-29 Ali Hatamizadeh , Hamid Hosseini , Niraj Patel , Jinseo Choi , Cameron C. Pole , Cory M. Hoeferlin , Steven D. Schwartz , Demetri Terzopoulos

Past few years have witnessed the artificial intelligence inspired evolution in various medical fields. The diagnosis and treatment of gliomas -- one of the most commonly seen brain tumors with low survival rate -- rely heavily on the…

Image and Video Processing · Electrical Eng. & Systems 2020-05-21 Feifan Wang

This paper provides theoretical and computational developments in statistical shape analysis of shape graphs, and demonstrates them using analysis of complex data from retinal blood-vessel (RBV) networks. The shape graphs are represented by…

Methodology · Statistics 2022-11-29 Aditi Basu Bal , Xiaoyang Guo , Tom Needham , Anuj Srivastava

Brain extraction or whole brain segmentation is an important first step in many of the neuroimage analysis pipelines. The accuracy and robustness of brain extraction, therefore, is crucial for the accuracy of the entire brain analysis…

Computer Vision and Pattern Recognition · Computer Science 2017-06-21 Seyed Sadegh Mohseni Salehi , Deniz Erdogmus , Ali Gholipour

Coronary artery stenosis is a critical health risk, and its precise identification in Coronary Angiography (CAG) can significantly aid medical practitioners in accurately evaluating the severity of a patient's condition. The complexity of…

Computer Vision and Pattern Recognition · Computer Science 2023-11-20 In Kyu Lee , Junsup Shin , Yong-Hee Lee , Jonghoe Ku , Hyun-Woo Kim

Electroencephalograms (EEGs) are brain dynamics measured outside the brain, which have been widely utilized in non-invasive brain-computer interface applications. Recently, various neural network approaches have been proposed to improve the…

Signal Processing · Electrical Eng. & Systems 2022-10-13 Yiqun Duan , Zhen Wang , Yi Li , Jianhang Tang , Yu-Kai Wang , Chin-Teng Lin

Binary Neural Networks (BNNs) have received significant attention due to their promising efficiency. Currently, most BNN studies directly adopt widely-used CNN architectures, which can be suboptimal for BNNs. This paper proposes a novel…

Artificial Intelligence · Computer Science 2021-03-30 Tianchen Zhao , Xuefei Ning , Xiangsheng Shi , Songyi Yang , Shuang Liang , Peng Lei , Jianfei Chen , Huazhong Yang , Yu Wang

Healthcare systems are challenged to deliver high-quality and efficient care. Studying patient flow in a hospital is particularly fundamental as it demonstrates effectiveness and efficiency of a hospital. Since hospital is a collection of…

Social and Information Networks · Computer Science 2020-04-22 Tesfamariam M Abuhay , Yemisrach G Getinet , Oleg G Metsker , Alexey N Yakovlev , Sergey V Kovalchuk

Supervised learning method requires a large volume of annotated datasets. Collecting such datasets is time-consuming and expensive. Until now, very few annotated COVID-19 imaging datasets are available. Although self-supervised learning…

Image and Video Processing · Electrical Eng. & Systems 2020-12-14 Li Sun , Ke Yu , Kayhan Batmanghelich

Reconstructing a map of neuronal connectivity is a critical challenge in contemporary neuroscience. Recent advances in high-throughput serial section electron microscopy (EM) have produced massive 3D image volumes of nanoscale brain tissue…

Angiography is widely used to detect, diagnose, and treat cerebrovascular diseases. While numerous techniques have been proposed to segment the vascular network from different imaging modalities, deep learning (DL) has emerged as a…

Image and Video Processing · Electrical Eng. & Systems 2023-08-29 Mumu Aktar , Hassan Rivaz , Marta Kersten-Oertel , Yiming Xiao

State-of-the-art visual analytics techniques in application domains are often designed by VA professionals over qualitative requirement collected from end users. These VA techniques may not leverage users' domain knowledge about how to…

Human-Computer Interaction · Computer Science 2021-04-06 Lei Shi

Visually comparing brain networks, or connectomes, is an essential task in the field of neuroscience. Especially relevant to the field of clinical neuroscience, group studies that examine differences between populations or changes over time…

Neurons and Cognition · Quantitative Biology 2017-07-03 Johnson J. G. Keiriz , Liang Zhan , Morris Chukhman , Olu Ajilore , Alex D. Leow , Angus G. Forbes

Segmentation of brain arterio-venous malformations (bAVMs) in 3D rotational angiographies (3DRA) is still an open problem in the literature, with high relevance for clinical practice. While deep learning models have been applied for…

Image and Video Processing · Electrical Eng. & Systems 2022-10-06 Camila García , Yibin Fang , Jianmin Liu , Ana Paula Narata , José Ignacio Orlando , Ignacio Larrabide
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