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Less than 1% of protein sequences are structurally and functionally annotated. Natural Language Processing (NLP) community has recently embraced self-supervised learning as a powerful approach to learn representations from unlabeled text,…

Biomolecules · Quantitative Biology 2020-12-08 Modestas Filipavicius , Matteo Manica , Joris Cadow , Maria Rodriguez Martinez

Generative, pre-trained transformers (GPTs, a.k.a. "Foundation Models") have reshaped natural language processing (NLP) through their versatility in diverse downstream tasks. However, their potential extends far beyond NLP. This paper…

Machine Learning · Computer Science 2023-06-22 Matthew B. A. McDermott , Bret Nestor , Peniel Argaw , Isaac Kohane

Pre-trained language models (PLM) have marked a huge leap in neural dialogue modeling. While PLMs are pre-trained on large-scale text corpora, they are usually fine-tuned on scarce dialogue data with specific domain knowledge and dialogue…

Computation and Language · Computer Science 2021-12-14 Xiaodong Gu , Kang Min Yoo , Sang-Woo Lee

GPT-2 and BERT demonstrate the effectiveness of using pre-trained language models (LMs) on various natural language processing tasks. However, LM fine-tuning often suffers from catastrophic forgetting when applied to resource-rich tasks. In…

Computation and Language · Computer Science 2022-06-22 Jiacheng Yang , Mingxuan Wang , Hao Zhou , Chengqi Zhao , Yong Yu , Weinan Zhang , Lei Li

Modern large-scale Pre-trained Language Models (PLMs) have achieved tremendous success on a wide range of downstream tasks. However, most of the LM pre-training objectives only focus on text reconstruction, but have not sought to learn…

Computation and Language · Computer Science 2022-10-28 Liliang Ren , Zixuan Zhang , Han Wang , Clare R. Voss , Chengxiang Zhai , Heng Ji

Pre-trained language models have achieved huge improvement on many NLP tasks. However, these methods are usually designed for written text, so they do not consider the properties of spoken language. Therefore, this paper aims at…

Computation and Language · Computer Science 2020-11-03 Chao-Wei Huang , Yun-Nung Chen

Language model pre-training, such as BERT, has achieved remarkable results in many NLP tasks. However, it is unclear why the pre-training-then-fine-tuning paradigm can improve performance and generalization capability across different…

Computation and Language · Computer Science 2019-08-16 Yaru Hao , Li Dong , Furu Wei , Ke Xu

Pre-trained models are widely used in the tasks of natural language processing nowadays. However, in the specific field of text simplification, the research on improving pre-trained models is still blank. In this work, we propose a…

Computation and Language · Computer Science 2022-04-19 Renliang Sun , Xiaojun Wan

Large-scale Transformer models have significantly promoted the recent development of natural language processing applications. However, little effort has been made to unify the effective models. In this paper, driven by providing a new set…

Computation and Language · Computer Science 2022-04-12 Dezhou Shen

Pre-trained large language models demonstrate potential in extracting information from DNA sequences, yet adapting to a variety of tasks and data modalities remains a challenge. To address this, we propose DNAGPT, a generalized DNA…

Genomics · Quantitative Biology 2023-09-01 Daoan Zhang , Weitong Zhang , Yu Zhao , Jianguo Zhang , Bing He , Chenchen Qin , Jianhua Yao

Recent years have seen a proliferation of attention mechanisms and the rise of Transformers in Natural Language Generation (NLG). Previously, state-of-the-art NLG architectures such as RNN and LSTM ran into vanishing gradient problems; as…

Computation and Language · Computer Science 2021-02-17 M. Onat Topal , Anil Bas , Imke van Heerden

Recent progress in NLP witnessed the development of large-scale pre-trained language models (GPT, BERT, XLNet, etc.) based on Transformer (Vaswani et al. 2017), and in a range of end tasks, such models have achieved state-of-the-art…

Computation and Language · Computer Science 2019-11-12 Pengxiang Cheng , Katrin Erk

Keyphrase Prediction (KP) is essential for identifying keyphrases in a document that can summarize its content. However, recent Natural Language Processing (NLP) advances have developed more efficient KP models using deep learning…

Computation and Language · Computer Science 2024-09-04 Muhammad Umair , Tangina Sultana , Young-Koo Lee

Pre-training by language modeling has become a popular and successful approach to NLP tasks, but we have yet to understand exactly what linguistic capacities these pre-training processes confer upon models. In this paper we introduce a…

Computation and Language · Computer Science 2020-07-14 Allyson Ettinger

Generating responses following a desired style has great potentials to extend applications of open-domain dialogue systems, yet is refrained by lacking of parallel data for training. In this work, we explore the challenging task with…

Computation and Language · Computer Science 2020-10-07 Ze Yang , Wei Wu , Can Xu , Xinnian Liang , Jiaqi Bai , Liran Wang , Wei Wang , Zhoujun Li

Fine-tuning pre-trained contextualized embedding models has become an integral part of the NLP pipeline. At the same time, probing has emerged as a way to investigate the linguistic knowledge captured by pre-trained models. Very little is,…

Computation and Language · Computer Science 2020-10-07 Marius Mosbach , Anna Khokhlova , Michael A. Hedderich , Dietrich Klakow

We propose a general method to break down a main complex task into a set of intermediary easier sub-tasks, which are formulated in natural language as binary questions related to the final target task. Our method allows for representing…

Computation and Language · Computer Science 2024-02-02 Felipe Urrutia , Cristian Buc , Valentin Barriere

Generative Pre-trained Transformer (GPT) is a state-of-the-art machine learning model capable of generating human-like text through natural language processing (NLP). GPT is trained on massive amounts of text data and uses deep learning…

The purpose of this study is to analyze the efficacy of transfer learning techniques and transformer-based models as applied to medical natural language processing (NLP) tasks, specifically radiological text classification. We used 1,977…

Computation and Language · Computer Science 2020-02-19 Daniel Ranti , Katie Hanss , Shan Zhao , Varun Arvind , Joseph Titano , Anthony Costa , Eric Oermann

In recent years, we have seen a colossal effort in pre-training multilingual text encoders using large-scale corpora in many languages to facilitate cross-lingual transfer learning. However, due to typological differences across languages,…

Computation and Language · Computer Science 2021-06-07 Wasi Uddin Ahmad , Haoran Li , Kai-Wei Chang , Yashar Mehdad
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