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Gene sequence search is a fundamental operation in computational genomics. Due to the petabyte scale of genome archives, most gene search systems now use hashing-based data structures such as Bloom Filters (BF). The state-of-the-art systems…

Information Retrieval · Computer Science 2024-06-24 Aditya Desai , Gaurav Gupta , Tianyi Zhang , Anshumali Shrivastava

Due to its low storage cost and fast query speed, hashing has been recognized to accomplish similarity search in large-scale multimedia retrieval applications. Particularly supervised hashing has recently received considerable research…

Computer Vision and Pattern Recognition · Computer Science 2019-04-17 Zheng Zhang , Guo-sen Xie , Yang Li , Sheng Li , Zi Huang

Weighted minwise hashing is a standard dimensionality reduction technique with applications to similarity search and large-scale kernel machines. We introduce a simple algorithm that takes a weighted set $x \in \mathbb{R}_{\geq 0}^{d}$ and…

Data Structures and Algorithms · Computer Science 2020-05-26 Tobias Christiani

LLM serving systems process heterogeneous query workloads where different categories exhibit different characteristics. Code queries cluster densely in embedding space while conversational queries distribute sparsely. Content staleness…

Databases · Computer Science 2025-11-03 Chen Wang , Xunzhuo Liu , Yue Zhu , Alaa Youssef , Priya Nagpurkar , Huamin Chen

We show the existence of a Locality-Sensitive Hashing (LSH) family for the angular distance that yields an approximate Near Neighbor Search algorithm with the asymptotically optimal running time exponent. Unlike earlier algorithms with this…

Data Structures and Algorithms · Computer Science 2015-09-10 Alexandr Andoni , Piotr Indyk , Thijs Laarhoven , Ilya Razenshteyn , Ludwig Schmidt

Single Molecule Real-Time (SMRT) sequencing is a recent advancement of Next Gen technology developed by Pacific Bio (PacBio). It comes with an explosion of long and noisy reads demanding cutting edge research to get most out of it. To deal…

Genomics · Quantitative Biology 2019-03-13 Angana Chakraborty , Sanghamitra Bandyopadhyay

Similarity joins are a fundamental database operation. Given data sets S and R, the goal of a similarity join is to find all points x in S and y in R with distance at most r. Recent research has investigated how locality-sensitive hashing…

Data Structures and Algorithms · Computer Science 2018-04-17 Samuel McCauley , Francesco Silvestri

Long-context inference in LLMs faces the dual challenges of quadratic attention complexity and prohibitive KV cache memory. While token-level sparse attention offers superior accuracy, its indexing overhead is costly; block-level methods…

Computation and Language · Computer Science 2026-04-10 Yuxuan Hu , Jianchao Tan , Jiaqi Zhang , Wen Zan , Pingwei Sun , Yifan Lu , Yerui Sun , Yuchen Xie , Xunliang Cai , Jing Zhang

Nowadays, data is represented by vectors. Retrieving those vectors, among millions and billions, that are similar to a given query is a ubiquitous problem, known as similarity search, of relevance for a wide range of applications.…

Machine Learning · Computer Science 2023-07-26 Cecilia Aguerrebere , Ishwar Bhati , Mark Hildebrand , Mariano Tepper , Ted Willke

The aim of this paper is to propose a geometric framework for modelling similarity search in large and multidimensional data spaces of general nature, which seems to be flexible enough to address such issues as analysis of complexity,…

Information Retrieval · Computer Science 2016-11-17 Vladimir Pestov

To overcome the barrier of storage and computation, the hashing technique has been widely used for nearest neighbor search in multimedia retrieval applications recently. Particularly, cross-modal retrieval that searches across different…

Information Retrieval · Computer Science 2019-05-16 Sarawut Markchit , Chih-Yi Chiu

This paper presents DLHT, a concurrent in-memory hashtable. Despite efforts to optimize hashtables, that go as far as sacrificing core functionality, state-of-the-art designs still incur multiple memory accesses per request and block…

Databases · Computer Science 2024-06-17 Antonios Katsarakis , Vasilis Gavrielatos , Nikos Ntarmos

The use of automatic methods, often referred to as Neural Architecture Search (NAS), in designing neural network architectures has recently drawn considerable attention. In this work, we present an efficient NAS approach, named HM- NAS,…

Machine Learning · Computer Science 2019-09-10 Shen Yan , Biyi Fang , Faen Zhang , Yu Zheng , Xiao Zeng , Hui Xu , Mi Zhang

Large-scale Nearest Neighbor (NN) search, though widely utilized in the similarity search field, remains challenged by the computational limitations inherent in processing large scale data. In an effort to decrease the computational expense…

Machine Learning · Computer Science 2026-04-24 Ashley N. Abraham , Andrew Strelzoff , Haley R. Dozier , Althea C. Henslee , Mark A. Chappell

As the demand for long-context large language models (LLMs) increases, models with context windows of up to 128K or 1M tokens are becoming increasingly prevalent. However, long-context LLM inference is challenging since the inference speed…

Computation and Language · Computer Science 2024-08-28 Jiaming Tang , Yilong Zhao , Kan Zhu , Guangxuan Xiao , Baris Kasikci , Song Han

Learning from set-structured data is an essential problem with many applications in machine learning and computer vision. This paper focuses on non-parametric and data-independent learning from set-structured data using approximate nearest…

Machine Learning · Computer Science 2022-02-10 Yuzhe Lu , Xinran Liu , Andrea Soltoggio , Soheil Kolouri

Customizable image retrieval from large datasets remains a critical challenge, particularly when preserving spatial relationships within images. Traditional hashing methods, primarily based on deep learning, often fail to capture spatial…

Computer Vision and Pattern Recognition · Computer Science 2024-05-24 Sanggeon Yun , Ryozo Masukawa , SungHeon Jeong , Mohsen Imani

Neyshabur and Srebro proposed Simple-LSH, which is the state-of-the-art hashing method for maximum inner product search (MIPS) with performance guarantee. We found that the performance of Simple-LSH, in both theory and practice, suffers…

Machine Learning · Computer Science 2018-10-23 Xiao Yan , Jinfeng Li , Xinyan Dai , Hongzhi Chen , James Cheng

Locality-sensitive hashing (LSH) has found widespread use as a fundamental primitive, particularly to accelerate nearest neighbor search. An LSH scheme for a similarity function $S:\mathcal{X} \times \mathcal{X} \to [0,1]$ is a distribution…

Data Structures and Algorithms · Computer Science 2026-05-13 Flavio Chierichetti , Mirko Giacchini , Ravi Kumar , Erasmo Tani

Recent years have witnessed wide application of hashing for large-scale image retrieval. However, most existing hashing methods are based on hand-crafted features which might not be optimally compatible with the hashing procedure. Recently,…

Machine Learning · Computer Science 2016-04-22 Wu-Jun Li , Sheng Wang , Wang-Cheng Kang
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