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Here practical aspects of conducting research via computer simulations are discussed. The following issues are addressed: software engineering, object-oriented software development, programming style, macros, make files, scripts, libraries,…

Condensed Matter · Physics 2009-02-02 Alexander K. Hartmann , Heiko Rieger

Cyanure is an open-source C++ software package with a Python interface. The goal of Cyanure is to provide state-of-the-art solvers for learning linear models, based on stochastic variance-reduced stochastic optimization with acceleration…

Machine Learning · Statistics 2019-12-23 Julien Mairal

We present a C++ software package called PhaseTracer for mapping out cosmological phases, and potential transitions between them, for Standard Model extensions with any number of scalar fields. PhaseTracer traces the minima of effective…

High Energy Physics - Phenomenology · Physics 2020-06-30 Peter Athron , Csaba Balazs , Andrew Fowlie , Yang Zhang

The fortran version of the AcerDET package has been published in [1], and used in the multiple publications on the predictions for physics at LHC. The package provides, starting from list of particles in the event, the list of reconstructed…

High Energy Physics - Phenomenology · Physics 2015-07-06 Patryk Mikos , Elzbieta Richter-Was

The preparation of a space-mission that carries out any kind of imaging to detect high-precision low-amplitude variability of its targets requires a robust model for the expected performance of its instruments. This model cannot be derived…

Instrumentation and Methods for Astrophysics · Physics 2016-10-27 P. Marcos-Arenal , W. Zima , J. De Ridder , R. Huygen , C. Aerts

We describe in these GLA2011 proceedings the software package LArSoft, a toolkit to perform simulation, analysis and reconstruction with the Liquid Argon (LAr) Time Projection Chambers (TPCs) within the US program of proposed detectors. We…

Instrumentation and Detectors · Physics 2014-01-09 Eric D. Church

Numerical simulations are ubiquitous in mathematics and computational science. Several industrial and clinical applications entail modeling complex multiphysics systems that evolve over a variety of spatial and temporal scales. This study…

Mathematical Software · Computer Science 2022-11-14 Pasquale Claudio Africa

Motivation: Accurate detection of sequence similarity and homologous recombination are essential parts of many evolutionary analyses. Results: We have developed SimPlot++, an open-source multiplatform application implemented in Python,…

Quantitative Methods · Quantitative Biology 2022-04-14 Stéphane Samson , Étienne Lord , Vladimir Makarenkov

In this paper, we present Coyote C++, a fully automated white-box unit testing tool for C and C++. Whereas existing tools have struggled to realize unit test generation for C++, Coyote C++ is able to produce high coverage results from unit…

Programming Languages · Computer Science 2024-01-05 Sanghoon Rho , Philipp Martens , Seungcheol Shin , Yeoneo Kim

Simulation is crucial in real-world robotics, offering safe, scalable, and efficient environments for developing applications, ranging from humanoid robots to autonomous vehicles and drones. While the Robot Operating System (ROS) has been…

Robotics · Computer Science 2026-01-13 Simon Sagmeister , Marcel Weinmann , Phillip Pitschi , Markus Lienkamp

Detecting software vulnerabilities is critical to ensuring the security and reliability of modern computer systems. Deep neural networks have shown promising results on vulnerability detection, but they lack the capability to capture global…

Cryptography and Security · Computer Science 2026-04-02 Sameer Shaik , Zhen Huang , Daniela Stan Raicu , Jacob Furst

RustMC is a stateless model checker that enables verification of concurrent Rust programs. As both Rust and C/C++ compile to LLVM IR, RustMC builds on GenMC which provides a verification framework for LLVM IR. This enables the automatic…

Programming Languages · Computer Science 2025-02-11 Oliver Pearce , Julien Lange , Dan O'Keeffe

Scanning Transmission Electron Microscopy (STEM) is a critical tool for imaging the properties of materials and biological specimens at atomic scale, yet our understanding of relevant electron beam damage mechanisms is incomplete. Recent…

Signal Processing · Electrical Eng. & Systems 2025-07-02 Amir Javadi Rad , Amirafshar Moshtaghpour , Dongdong Chen , Angus I. Kirkland

We present the details of a simulation suite for modeling the effects of readout with SLAC Microresonator RF (SMuRF) electronics. The SMuRF electronics are a warm readout and control system for use with superconducting microwave…

Instrumentation and Methods for Astrophysics · Physics 2022-08-04 Cyndia Yu , Zeeshan Ahmed , J. Mitch D'Ewart , Josef C. Frisch , Shawn W. Henderson , Max Silva-Feaver

The CDF detector simulation framework is integrated into an AC++ application used to process events in the CDF experiment. The simulation framework is based on the GEANT3 package. It holds the detector element geometry descriptions, allows…

Computational Physics · Physics 2014-11-18 E. Gerchtein , M. Paulini

We describe software that simulates the hardware of a scanning force microscope. The essential feature of the software is its real-time response, which is critical for mimicking the behavior of real scanning probe hardware. The simulator…

Mesoscale and Nanoscale Physics · Physics 2014-09-09 Venkat Chandrasekhar , Manan Mehta

Quantum computing, an innovative computing system carrying prominent processing rate, is meant to be the solutions to problems in many fields. Among these realms, the most intuitive application is to help chemical researchers correctly…

Quantum Physics · Physics 2022-12-29 Qingchun Wang , Huan-Yu Liu , Qing-Song Li , Jianyu Zhao , Qiankun Gong , Ye Li , Yu-Chun Wu , Guo-Ping Guo

Signals can be interpreted as composed of a rapidly varying component modulated by a slower varying envelope. Identifying this envelope is an essential operation in signal processing, with applications in areas ranging from seismology to…

Sound · Computer Science 2021-10-25 Carlos Tarjano , Valdecy Pereira

Several types of detectors are used to detect charged particles in particle and nuclear physics experiments. Since the semiconductor detector has superior spatial and kinematic resolutions as well as good response time than other types of…

Instrumentation and Detectors · Physics 2020-12-02 Beomkyu Kim , Jeongsu Bok , Jaeyoon Cho , Jiyeon Cho , Jiyeon Kwon , Hyungjun Lee , Minjung Kweon

Software development in high energy physics experiments offers unique experience with rapidly changing environment and variety of different standards and frameworks that software must be adapted to. As such, regular methods of software…

High Energy Physics - Phenomenology · Physics 2010-09-21 Tomasz Przedzinski