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Developers heavily rely on Application Programming Interfaces (APIs) from libraries to build their software. As software evolves, developers may need to replace the used libraries with alternate libraries, a process known as library…

Software Engineering · Computer Science 2024-02-01 Mohayeminul Islam , Ajay Kumar Jha , Ildar Akhmetov , Sarah Nadi

Open-source software (OSS) plays a crucial role in modern software development. Utilizing OSS code can greatly accelerate software development, reduce redundancy, and enhance reliability. Python, a widely adopted programming language, is…

Software Engineering · Computer Science 2024-08-21 Zhiqing Zhong , Shilin He , Haoxuan Wang , Boxi Yu , Haowen Yang , Pinjia He

Background: Open source software (OSS) libraries are critical components of modern software systems, yet their metadata-particularly links to source code repositories and donation platforms-is often incomplete, outdated, or inconsistent.…

Software Engineering · Computer Science 2026-05-04 Alexandros Tsakpinis , Nicolas Raube , Alexander Pretschner

A large amount of data is produced every second from modern information systems such as mobile devices, the world wide web, Internet of Things, social media, etc. Analysis and mining of this massive data requires a lot of advanced tools and…

Machine Learning · Computer Science 2020-01-13 Rising Odegua , Festus Ikpotokin

Language-based ecosystems (LBE), i.e., software ecosystems based on a single programming language, are very common. Examples include the npm ecosystem for JavaScript, and PyPI for Python. These environments encourage code reuse between…

Cryptography and Security · Computer Science 2021-12-01 Ruturaj K. Vaidya , Lorenzo De Carli , Drew Davidson , Vaibhav Rastogi

Large language models (LLMs) have developed rapidly in recent years, revolutionizing various fields. Despite their widespread success, LLMs heavily rely on external code dependencies from package management systems, creating a complex and…

Cryptography and Security · Computer Science 2025-09-01 Shuhan Liu , Xing Hu , Xin Xia , David Lo , Xiaohu Yang

We introduce GraSPy, a Python library devoted to statistical inference, machine learning, and visualization of random graphs and graph populations. This package provides flexible and easy-to-use algorithms for analyzing and understanding…

Social and Information Networks · Computer Science 2019-10-25 Jaewon Chung , Benjamin D. Pedigo , Eric W. Bridgeford , Bijan K. Varjavand , Hayden S. Helm , Joshua T. Vogelstein

The rise of supply chain attacks via malicious Python packages demands robust detection solutions. Current approaches, however, overlook two critical challenges: robustness against adversarial source code transformations and adaptability to…

Cryptography and Security · Computer Science 2025-12-05 Biagio Montaruli , Luca Compagna , Serena Elisa Ponta , Davide Balzarotti

The increasing popularity of certain programming languages has spurred the creation of ecosystem-specific package repositories and package managers. Such repositories (e.g., npm, PyPI) serve as public databases that users can query to…

Cryptography and Security · Computer Science 2023-10-09 Piergiorgio Ladisa , Merve Sahin , Serena Elisa Ponta , Marco Rosa , Matias Martinez , Olivier Barais

Software engineers regularly use JavaScript and Python for both front-end and back-end automation tasks. On top of JavaScript and Python, there are several frameworks to facilitate automation tasks further. Some of these frameworks are Node…

Cryptography and Security · Computer Science 2021-08-24 Berkay Kaplan , Jingyu Qian

Linux users expect fresh packages in the official repositories of their distributions. Yet, due to philosophical divergences, the packages available in various distributions do not all have the same degree of freshness. Users therefore need…

Software Engineering · Computer Science 2021-03-17 Damien Legay , Alexandre Decan , Tom Mens

In software engineering, different approaches and machine learning models leverage different types of data: source code, textual information, historical data. An important part of any project is its dependencies. The list of dependencies is…

Software Engineering · Computer Science 2022-09-09 Yaroslav Golubev , Egor Bogomolov , Egor Bulychev , Timofey Bryksin

Software packages developed and distributed through package managers extensively depend on other packages. These dependencies are regularly updated, for example to add new features, resolve bugs or fix security issues. In order to take full…

Software Engineering · Computer Science 2018-06-14 Alexandre Decan , Tom Mens , Eleni Constantinou

The reproducibility crisis in scientific computing constrains robotics research. Existing studies reveal that up to 70% of robotics algorithms cannot be reproduced by independent teams, while many others fail to reach deployment because…

Software ecosystems (e.g., npm, PyPI) are the backbone of modern software developments. Developers add new packages to ecosystems every day to solve new problems or provide alternative solutions, causing obsolete packages to decline in…

Software Engineering · Computer Science 2023-08-21 Suhaib Mujahid , Diego Elias Costa , Rabe Abdalkareem , Emad Shihab

A software supply chain attack is characterized by the injection of malicious code into a software package in order to compromise dependent systems further down the chain. Recent years saw a number of supply chain attacks that leverage the…

Cryptography and Security · Computer Science 2020-05-20 Marc Ohm , Henrik Plate , Arnold Sykosch , Michael Meier

Communication surrounding the development of an open source project largely occurs outside the software repository itself. Historically, large communities often used a collection of mailing lists to discuss the different aspects of their…

Computers and Society · Computer Science 2022-04-04 Melanie Warrick , Samuel F. Rosenblatt , Jean-Gabriel Young , Amanda Casari , Laurent Hébert-Dufresne , James Bagrow

Novelpy (v1.2) is an open-source Python package designed to compute bibliometrics indicators. The package aims to provide a tool to the scientometrics community that centralizes different measures of novelty and disruptiveness, enables…

Digital Libraries · Computer Science 2022-11-21 Pierre Pelletier , Kevin Wirtz

Managing project dependencies is a key maintenance issue in software development. Developers need to choose an update strategy that allows them to receive important updates and fixes while protecting them from breaking changes. Semantic…

Software Engineering · Computer Science 2023-05-26 Abbas Javan Jafari , Diego Elias Costa , Emad Shihab , Rabe Abdalkareem

Reusing third-party software packages is a common practice in software development. As the scale and complexity of open-source software (OSS) projects continue to grow (e.g., Linux distributions), the number of reused third-party packages…

Software Engineering · Computer Science 2024-12-31 Dongming Jin , Nianyu Li , Kai Yang , Minghui Zhou , Zhi Jin