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Ecologists have long investigated how demographic and movement parameters determine the spatial distribution and critical habitat size of a population. However, most models oversimplify movement behavior, neglecting how landscape…

Populations and Evolution · Quantitative Biology 2024-03-11 Vivian Dornelas , Pablo de Castro , Justin M. Calabrese , William F. Fagan , Ricardo Martinez-Garcia

Motivated by various recent experimental findings, we propose a dynamical model of intermittently self-propelled particles: active particles that recurrently switch between two modes of motion, namely an active run-state and a turn state,…

Soft Condensed Matter · Physics 2025-10-30 Agniva Datta , Carsten Beta , Robert Großmann

We study the Brownian motion of a classical particle in one-dimensional inhomogeneous environments where the transition probabilities follow quasiperiodic or aperiodic distributions. Exploiting an exact correspondence with the…

Statistical Mechanics · Physics 2009-10-31 F. Igloi , L. Turban , H. Rieger

The asymmetric simple exclusion process with additional Langmuir kinetics, i.e. attachment and detachment in the bulk, is a paradigmatic model for intracellular transport. Here we study this model in the presence of randomly distributed…

Statistical Mechanics · Physics 2009-11-13 Philip Greulich , Andreas Schadschneider

We study deterministic discrete time exclusion type spatially heterogeneous particle processes in continuum. A typical example of this sort is a traffic flow model with obstacles: traffic lights, speed bumps, spatially varying local…

Dynamical Systems · Mathematics 2015-05-28 Michael Blank

Various biological cells secrete diffusing chemical compounds into their environment for communication purposes. Secretion usually takes place over the cell membrane in a spatially heterogeneous manner. Mathematical models of these…

Numerical Analysis · Mathematics 2025-11-20 Qiyao Peng , Sander C. Hille

We consider a continuum aggregation model with nonlinear local repulsion given by a degenerate power-law diffusion with general exponent. The steady states and their properties in one dimension are studied both analytically and numerically,…

Analysis of PDEs · Mathematics 2014-03-17 Martin Burger , Razvan Fetecau , Yanghong Huang

We consider the symmetric simple exclusion process in $\mathbb Z^d$ with quenched bounded dynamic random conductances and prove its hydrodynamic limit in path space. The main tool is the connection, due to the self-duality of the process,…

Probability · Mathematics 2021-02-03 Frank Redig , Ellen Saada , Federico Sau

We investigate the fluctuations around the average density profile in the weakly asymmetric exclusion process with open boundaries in the steady state. We show that these fluctuations are given, in the macroscopic limit, by a centered…

Other Condensed Matter · Physics 2009-11-11 B. Derrida , C. Enaud , C. Landim , S. Olla

The spatio-temporal dynamics of a population present one of the most fascinating aspects and challenges for ecological modelling. In this article we review some simple mathematical models, based on one dimensional…

Populations and Evolution · Quantitative Biology 2008-11-18 A. B. Ryabov , B. Blasius

We propose and study a one-dimensional (1D) model consisting of two lanes with open boundaries. One of the lanes executes diffusive and the other lane driven unidirectional or asymmetric exclusion dynamics, which are mutually coupled…

Statistical Mechanics · Physics 2023-11-27 Atri Goswami , Utsa Dey , Sudip Mukherjee

The quasi-coherent effects in two-dimensional incompressible turbulence are analyzed starting from the test particle trajectories. They can acquire coherent aspects when the stochastic potential has slow time variation and the motion is not…

Plasma Physics · Physics 2017-04-05 M. Vlad , F. Spineanu

Tracer diffusion in crowded environments is central to many biological and soft matter systems, but quantitative frameworks for linking tracer motion to environmental structure remain limited. Here, we study the transport of rigid tracers…

Soft Condensed Matter · Physics 2026-05-07 Jinseok Lee , Tong Lin , Mengyang Gu , Yimin Luo

We study the probability of arbitrary density profiles in conserving diffusive fields which are driven by the boundaries. We demonstrate the existence of singularities in the large-deviation functional, the direct analog of the free-energy…

Statistical Mechanics · Physics 2015-10-07 Guy Bunin , Yariv Kafri , Daniel Podolsky

Macroscopic models for systems involving diffusion, short-range repulsion, and long-range attraction have been studied extensively in the last decades. In this paper we extend the analysis to a system for two species interacting with each…

Analysis of PDEs · Mathematics 2018-03-23 Martin Burger , Marco Di Francesco , Simone Fagioli , Angela Stevens

Experimental studies of the diffusion of biomolecules in the environment of biological cells are routinely confronted with multiple sources of stochasticity, whose identification renders the detailed data analysis of single molecule…

Statistical Mechanics · Physics 2015-06-15 Jae-Hyung Jeon , Eli Barkai , R. Metzler

We introduce a stochastic individual model for the spatial behavior of an animal population of dispersive and competitive species, considering various kinds of biological effects, such as heterogeneity of environmental conditions, mutual…

Probability · Mathematics 2016-07-05 Joaquin Fontbona , Sylvie Méléard

Diffusion of colloidal particles in a complex environment such as polymer networks or biological cells is a topic of high complexity with significant biological and medical relevance. In such situations, the interaction between the…

Statistical Mechanics · Physics 2015-11-10 Andreas M. Menzel

Motivated by the observation that anomalous diffusion is a realistic feature in the dynamics of biological populations, we investigate its implications in a paradigmatic model for the evolution of a single species density $u(x,t)$. The…

Biological Physics · Physics 2012-12-05 Eduardo H. Colombo , Celia Anteneodo

This paper proposes a totally asymmetric simple exclusion process on a traveling lane, which is equipped with a queueing system and functions of site assignments along the parking lane. In the proposed system, new particles arrive at the…

Cellular Automata and Lattice Gases · Physics 2018-10-10 Satori Tsuzuki , Daichi Yanagisawa , Katsuhiro Nishinari
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