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This study develops a graph search algorithm to find the optimal discrimination path for the binary classification problem. The objective function is defined as the difference of variations between the true positive (TP) and false positive…

Machine Learning · Computer Science 2024-01-10 Qinwu Xu

Graph Neural Networks (GNNs) are a predominant method for graph representation learning. However, beyond subgraph frequency estimation, their application to network motif significance-profile (SP) prediction remains under-explored, with no…

Machine Learning · Computer Science 2025-07-11 Pedro C. Vieira , Miguel E. P. Silva , Pedro Manuel Pinto Ribeiro

Gaussian graphical model selection is usually studied under independent sampling, but in many applications observations arise from dependent dynamics. We study structure learning when the data consist of a single trajectory of Gaussian…

Machine Learning · Computer Science 2026-05-13 Vignesh Tirukkonda , Anirudh Rayas , Gautam Dasarathy

Graph vertex sampling set selection aims at selecting a set of ver-tices of a graph such that the space of graph signals that can be reconstructed exactly from those samples alone is maximal. In this context, we propose to extend sampling…

Signal Processing · Electrical Eng. & Systems 2020-04-24 Benjamin Girault , Antonio Ortega , Shrikanth S. Narayayan

A primary challenge in metagenomics is reconstructing individual microbial genomes from the mixture of short fragments created by sequencing. Recent work leverages the sparsity of the assembly graph to find $r$-dominating sets which enable…

Data Structures and Algorithms · Computer Science 2023-01-24 Yosuke Mizutani , Annie Staker , Blair D. Sullivan

Sampling methods (e.g., node-wise, layer-wise, or subgraph) has become an indispensable strategy to speed up training large-scale Graph Neural Networks (GNNs). However, existing sampling methods are mostly based on the graph structural…

Machine Learning · Computer Science 2021-09-07 Weilin Cong , Rana Forsati , Mahmut Kandemir , Mehrdad Mahdavi

Graph Convolutional Networks (GCNs) have achieved impressive empirical advancement across a wide variety of semi-supervised node classification tasks. Despite their great success, training GCNs on large graphs suffers from computational and…

Machine Learning · Computer Science 2021-11-02 Weilin Cong , Morteza Ramezani , Mehrdad Mahdavi

What is the best way to match the nodes of two graphs? This graph alignment problem generalizes graph isomorphism and arises in applications from social network analysis to bioinformatics. Some solutions assume that auxiliary information on…

Information Retrieval · Computer Science 2021-06-14 Judith Hermanns , Anton Tsitsulin , Marina Munkhoeva , Alex Bronstein , Davide Mottin , Panagiotis Karras

Dense subgraph extraction is a fundamental problem in graph analysis and data mining, aimed at identifying cohesive and densely connected substructures within a given graph. It plays a crucial role in various domains, including social…

Data Structures and Algorithms · Computer Science 2024-03-01 Chia-Yang Hung , Chih-Ya Shen

A dominating set D in a graph G is a subset of its vertices such that every vertex of the graph which does not belong to set D is adjacent to at least one vertex from set D. A set of vertices of graph G is a global dominating set if it is a…

Discrete Mathematics · Computer Science 2024-10-25 Ernesto Parra Inza , Nodari Vakhania , Jose M. Sigarreta Almira , Frank A. Hernández Mira

Multiple sampling-based methods have been developed for approximating and accelerating node embedding aggregation in graph convolutional networks (GCNs) training. Among them, a layer-wise approach recursively performs importance sampling to…

Machine Learning · Computer Science 2023-06-19 Yifan Chen , Tianning Xu , Dilek Hakkani-Tur , Di Jin , Yun Yang , Ruoqing Zhu

We focus in this work on the estimation of the first $k$ eigenvectors of any graph Laplacian using filtering of Gaussian random signals. We prove that we only need $k$ such signals to be able to exactly recover as many of the smallest…

Data Structures and Algorithms · Computer Science 2016-11-07 Johan Paratte , Lionel Martin

Many data-fitting applications require the solution of an optimization problem involving a sum of large number of functions of high dimensional parameter. Here, we consider the problem of minimizing a sum of $n$ functions over a convex…

Optimization and Control · Mathematics 2016-02-29 Farbod Roosta-Khorasani , Michael W. Mahoney

We study the fair k-set selection problem where we aim to select $k$ sets from a given set system such that the (weighted) occurrence times that each element appears in these $k$ selected sets are balanced, i.e., the maximum (weighted)…

Data Structures and Algorithms · Computer Science 2025-05-20 Shi Li , Chenyang Xu , Ruilong Zhang

This paper proposes a dynamic sensor scheduling method for sensor networks. In sensor network applications, we often need multiple equally-informative node subsets that are activated sequentially to make a sensor network robust against…

Signal Processing · Electrical Eng. & Systems 2026-02-24 Ryouke Ikura , Junya Hara , Hiroshi Higashi , Yuichi Tanaka

In this work we provide a new technique to design fast approximation algorithms for graph problems where the points of the graph lie in a metric space. Specifically, we present a sampling approach for such metric graphs that, using a…

Data Structures and Algorithms · Computer Science 2018-07-26 Hossein Esfandiari , Michael Mitzenmacher

Training Graph Neural Networks(GNNs) on a large monolithic graph presents unique challenges as the graph cannot fit within a single machine and it cannot be decomposed into smaller disconnected components. Distributed sampling-based…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-11-30 Hesham Mostafa , Adam Grabowski , Md Asadullah Turja , Juan Cervino , Alejandro Ribeiro , Nageen Himayat

Many Machine Learning algorithms are formulated as regularized optimization problems, but their performance hinges on a regularization parameter that needs to be calibrated to each application at hand. In this paper, we propose a general…

Machine Learning · Statistics 2021-03-31 Mike Laszkiewicz , Asja Fischer , Johannes Lederer

The objective of graph coarsening is to generate smaller, more manageable graphs while preserving key information of the original graph. Previous work were mainly based on the perspective of spectrum-preserving, using some predefined…

Artificial Intelligence · Computer Science 2025-06-25 Shuyin Xia , Guan Wang , Gaojie Xu , Sen Zhao , Guoyin Wang

The Max-Cut problem is a well known combinatorial optimization problem. In this paper we describe a fast approximation method. Given a graph G, we want to find a cut whose size is maximal among all possible cuts. A cut is a partition of the…

Analysis of PDEs · Mathematics 2019-07-11 Blaine Keetch , Yves van Gennip