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Biological and physical systems often exhibit distinct structures at different spatial/temporal scales. Persistent homology is an algebraic tool that provides a mathematical framework for analyzing the multi-scale structures frequently…

Algebraic Topology · Mathematics 2016-02-01 Jonathan Jaquette , Miroslav Kramár

Persistent homology, a technique from computational topology, has recently shown strong empirical performance in the context of graph classification. Being able to capture long range graph properties via higher-order topological features,…

Machine Learning · Computer Science 2024-12-20 Rubén Ballester , Bastian Rieck

In this work, we construct a persistent version of the well-known Leray spectral sequence. More precisely, we construct a spectral sequence that computes the persistent cohomology of a space from the persistent cohomology in each open set…

Algebraic Topology · Mathematics 2026-04-07 Edivaldo L. dos Santos , Telmo I. Acosta Vellozo

We investigate combinatorial dynamical systems on simplicial complexes considered as {\em finite topological spaces}. Such systems arise in a natural way from sampling dynamics and may be used to reconstruct some features of the dynamics…

Algebraic Topology · Mathematics 2018-07-12 Tamal K. Dey , Mateusz Juda , Tomasz Kapela , Jacek Kubica , Michal Lipinski , Marian Mrozek

This paper addresses the challenge of extending general finite sequences of real numbers within a subinterval of the real line, maintaining their inherent statistical properties by employing machine learning. Our focus lies on preserving…

Machine Learning · Computer Science 2023-12-05 Dimitris Vartziotis , George Dasoulas , Florian Pausinger

In this work, we explore links between natural homology and persistent homology for the classification of directed spaces. The former is an algebraic invariant of directed spaces, a semantic model of concurrent programs. The latter was…

Algebraic Topology · Mathematics 2024-08-07 Cameron Calk , Eric Goubault , Philippe Malbos

Persistent homology (PH) is one of the most popular tools in topological data analysis (TDA), while graph theory has had a significant impact on data science. Our earlier work introduced the persistent spectral graph (PSG) theory as a…

Algebraic Topology · Mathematics 2020-12-22 Rui Wang , Rundong Zhao , Emily Ribando-Gros , Jiahui Chen , Yiying Tong , Guo-Wei Wei

We define a class of multiparameter persistence modules that arise from a one-parameter family of functions on a topological space and prove that these persistence modules are stable. We show that this construction can produce…

Algebraic Topology · Mathematics 2022-05-19 Peter Bubenik , Michael J. Catanzaro

Topological data analysis uses tools from topology -- the mathematical area that studies shapes -- to create representations of data. In particular, in persistent homology, one studies one-parameter families of spaces associated with data,…

Machine Learning · Computer Science 2020-12-01 Guido Montúfar , Nina Otter , Yuguang Wang

We give a self-contained treatment of the theory of persistence modules indexed over the real line. We give new proofs of the standard results. Persistence diagrams are constructed using measure theory. Linear algebra lemmas are simplified…

Algebraic Topology · Mathematics 2013-03-21 Frederic Chazal , Vin de Silva , Marc Glisse , Steve Oudot

Zigzag persistent homology is a powerful generalisation of persistent homology that allows one not only to compute persistence diagrams with less noise and using less memory, but also to use persistence in new fields of application.…

Computational Geometry · Computer Science 2016-08-23 Clément Maria , Steve Oudot

Persistent homology is typically computed through persistent cohomology. While this generally improves the running time significantly, it does not facilitate extraction of homology representatives. The mentioned representatives are…

Algebraic Topology · Mathematics 2024-11-13 Matija Čufar , Žiga Virk

0-dimensional persistent homology is known, from a computational point of view, as the easy case. Indeed, given a list of $n$ edges in non-decreasing order of filtration value, one only needs a union-find data structure to keep track of the…

Computational Geometry · Computer Science 2023-12-12 Marc Glisse

We propose a unified framework based on persistent homology (PH) to characterize both local and global structures in disordered systems. It can simultaneously generate local and global descriptors using the same algorithm and data…

Disordered Systems and Neural Networks · Physics 2025-11-03 An Wang , Li Zou

Persistent homology enables fast and computable comparison of topological objects. However, it is naturally limited to the analysis of topological spaces. We extend the theory of persistence, by guaranteeing robustness and computability to…

Combinatorics · Mathematics 2020-09-16 Mattia G. Bergomi , Massimo Ferri , Pietro Vertechi , Lorenzo Zuffi

A multicomplex structure is defined from an ordered lattice of multigraphs. This structure will help us to observe the features of Persistent Homology in this context, its interaction with the ordering and the repercussions of the process…

Algebraic Topology · Mathematics 2025-02-05 Joaquin Diaz Boils

We address combinatorial problems that can be formulated as minimization of a partially separable function of discrete variables (energy minimization in graphical models, weighted constraint satisfaction, pseudo-Boolean optimization, 0-1…

Computer Vision and Pattern Recognition · Computer Science 2015-05-05 Alexander Shekhovtsov

Persistent Homology (PH) allows tracking homology features like loops, holes and their higher-dimensional analogs, along with a single-parameter family of nested spaces. Currently, computing descriptors for complex data characterized by…

Computational Geometry · Computer Science 2020-10-19 Sara Scaramuccia , Federico Iuricich , Leila De Floriani , Claudia Landi

An algorithm is presented that constructs an acyclic partial matching on the cells of a given simplicial complex from a vector-valued function defined on the vertices and extended to each simplex by taking the least common upper bound of…

Computational Geometry · Computer Science 2017-03-24 Madjid Allili , Tomasz Kaczynski , Claudia Landi , Filippo Masoni

In this paper, we consider topological featurizations of data defined over simplicial complexes, like images and labeled graphs, obtained by convolving this data with various filters before computing persistence. Viewing a convolution…

Algebraic Topology · Mathematics 2024-01-26 Elchanan Solomon , Paul Bendich