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The integral equation coarse-graining (IECG) approach is a promising high-level coarse-graining (CG) method for polymer melts, with variable resolution from soft spheres to multi CG sites, which preserves the structural and thermodynamical…

Soft Condensed Matter · Physics 2018-07-24 Mohammadhasan Dinpajooh , Marina G. Guenza

Grain growth simulation is crucial for predicting metallic material microstructure evolution during annealing and resulting final mechanical properties, but traditional partial differential equation-based methods are computationally…

Materials Science · Physics 2025-05-09 Pungponhavoan Tep , Marc Bernacki

The investigation of plant transcriptional regulation constitutes a fundamental basis for crop breeding, where cis-regulatory elements (CREs), as the key factor determining gene expression, have become the focus of crop genetic improvement…

Genomics · Quantitative Biology 2025-05-16 Yingjun Wu , Jingyun Huang , Liang Ming , Pengcheng Deng , Maojun Wang , Zeyu Zhang

Coarse-graining (CG) of molecular simulations simplifies the particle representation by grouping selected atoms into pseudo-beads and drastically accelerates simulation. However, such CG procedure induces information losses, which makes…

Machine Learning · Computer Science 2022-06-20 Wujie Wang , Minkai Xu , Chen Cai , Benjamin Kurt Miller , Tess Smidt , Yusu Wang , Jian Tang , Rafael Gómez-Bombarelli

Essential protein plays a crucial role in the process of cell life. The identification of essential proteins can not only promote the development of drug target technology, but also contribute to the mechanism of biological evolution. There…

Molecular Networks · Quantitative Biology 2020-05-20 Pengli Lu , JingJuan Yu

Accurate and timely crop yield prediction is crucial for global food security and modern agricultural management. Traditional methods often lack the scalability and granularity required for precision farming. This paper introduces FARM:…

Computer Vision and Pattern Recognition · Computer Science 2026-01-06 Shayan Nejadshamsi , Yuanyuan Zhang , Shadi Zaki , Brock Porth , Lysa Porth , Vahab Khoshdel

This work presents a novel framework governing the development of an efficient, accurate, and transferable coarse-grained (CG) model of a polyether material. The proposed framework combines the two fundamentally different classical…

This article deals with the study of predicting the confinement effect of carbon fiber reinforced polymers (CFRPs) on concrete cylinder strength using metaheuristics-based artificial neural networks. A detailed database of 708 CFRP confined…

Neural and Evolutionary Computing · Computer Science 2024-03-22 Sarmed Wahab , Mohamed Suleiman , Faisal Shabbir , Nasim Shakouri Mahmoudabadi , Sarmad Waqas , Nouman Herl , Afaq Ahmad

Neuro-encoded expression programming(NEEP) that aims to offer a novel continuous representation of combinatorial encoding for genetic programming methods is proposed in this paper. Genetic programming with linear representation uses…

Neural and Evolutionary Computing · Computer Science 2021-04-12 Aftab Anjum , Fengyang Sun , Lin Wang , Jeff Orchard

Multiscale molecular modeling is widely applied in scientific research of molecular properties over large time and length scales. Two specific challenges are commonly present in multiscale modeling, provided that information between the…

Computational Physics · Physics 2024-07-23 Jun Zhang , Xiaohan Lin , Weinan E , Yi Qin Gao

Machine Learning (ML) algorithms have been used for assessing soil quality parameters along with non-destructive methodologies. Among spectroscopic analytical methodologies, energy dispersive X-ray fluorescence (EDXRF) is one of the more…

This article proposes an optimization framework, based on Genetic Algorithms (GA), to calibrate the constitutive law of von Wolffersdorff. This constitutive law is known as Sand Hypoplasticity (SH), and allows for robust and accurate…

Computational Engineering, Finance, and Science · Computer Science 2020-06-16 Francisco J. Mendez , Antonio Pasculli , Miguel A. Mendez , Nicola Sciarra

In deep learning inference, model parameters are pruned and quantized to reduce the model size. Compression methods and common subexpression (CSE) elimination algorithms are applied on sparse constant matrices to deploy the models on…

Machine Learning · Computer Science 2023-03-29 Emre Bilgili , Arda Yurdakul

Robust generalization under climate change remains a major challenge for machine learning applications in climate science. Most existing approaches struggle to extrapolate beyond the climate they were trained on, leading to a strong…

Atmospheric and Oceanic Physics · Physics 2025-09-03 Shuchang Liu , Paul A. O'Gorman

The study of genetic variants can help find correlating population groups to identify cohorts that are predisposed to common diseases and explain differences in disease susceptibility and how patients react to drugs. Machine learning…

The performance of pavement under loading depends on the strength of the subgrade. However, experimental estimation of properties of pavement strengths such as California bearing ratio (CBR), unconfined compressive strength (UCS) and…

Machine Learning · Computer Science 2025-01-10 Ismail B. Mustapha , Muyideen Abdulkareem , Shafaatunnur Hasan , Abideen Ganiyu , Hatem Nabus , Jin Chai Lee

Emerging Implicit Neural Representation (INR) is a promising data compression technique, which represents the data using the parameters of a Deep Neural Network (DNN). Existing methods manually partition a complex scene into local regions…

Computer Vision and Pattern Recognition · Computer Science 2023-12-05 Jianchen Zhao , Cheng-Ching Tseng , Ming Lu , Ruichuan An , Xiaobao Wei , He Sun , Shanghang Zhang

With the growth of 3D applications and the rapid increase in sensor-collected 3D point cloud data, there is a rising demand for efficient compression algorithms. Most existing learning-based compression methods handle geometry and color…

Computer Vision and Pattern Recognition · Computer Science 2025-03-25 Tianxin Huang , Gim Hee Lee

The exponential growth in parameter size and computational complexity of deep models poses significant challenges for efficient deployment. The core problem of existing compression methods is that different layers of the model have…

Machine Learning · Computer Science 2025-12-24 Boyang Zhang , Daning Cheng , Yunquan Zhang , Meiqi Tu , Fangming Liu , Jiake Tian

Combined high-energy X-ray diffraction microscopy (HEDM) and crystal plasticity finite element (CPFE) modeling studies have emerged as a preferred paradigm to shed insight into the evolution of elasticity and plasticity at the intragrain…

Materials Science · Physics 2026-02-10 Jeremiah Lethoba , Romain Quey , Darren C. Pagan , Matthew Kasemer