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Big data collected from the Internet possess great potential to reveal the ever-changing trends in society. In particular, accurate infectious disease tracking with Internet data has grown in popularity, providing invaluable information for…

Applications · Statistics 2023-08-22 Shaoyang Ning , Ahmed Hussain , Qing Wang

Early detection and modeling of a contagious epidemic can provide important guidance about quelling the contagion, controlling its spread, or the effective design of countermeasures. A topic of recent interest has been to design social…

Social and Information Networks · Computer Science 2016-03-09 Huijuan Shao , K. S. M. Tozammel Hossain , Hao Wu , Maleq Khan , Anil Vullikanti , B. Aditya Prakash , Madhav Marathe , Naren Ramakrishnan

Influenza-like illness (ILI) estimation from web search data is an important web analytics task. The basic idea is to use the frequencies of queries in web search logs that are correlated with past ILI activity as features when estimating…

Information Retrieval · Computer Science 2018-02-21 Niels Dalum Hansen , Kåre Mølbak , Ingemar J. Cox , Christina Lioma

Infectious diseases pose significant human and economic burdens. Accurately forecasting disease incidence can enable public health agencies to respond effectively to existing or emerging diseases. Despite progress in the field, developing…

Machine Learning · Computer Science 2024-09-04 Michael Morris

Systems that exploit publicly available user generated content such as Twitter messages have been successful in tracking seasonal influenza. We developed a novel filtering method for Influenza-Like-Illnesses (ILI)-related messages using 587…

Social and Information Networks · Computer Science 2016-11-17 Son Doan , Lucila Ohno-Machado , Nigel Collier

Accurate and reliable predictions of infectious disease dynamics can be valuable to public health organizations that plan interventions to decrease or prevent disease transmission. A great variety of models have been developed for this…

Machine Learning · Statistics 2018-07-04 Evan L. Ray , Nicholas G. Reich

We analyze over 500 million Twitter messages from an eight month period and find that tracking a small number of flu-related keywords allows us to forecast future influenza rates with high accuracy, obtaining a 95% correlation with national…

Information Retrieval · Computer Science 2010-07-28 Aron Culotta

While digital trace data from sources like search engines hold enormous potential for tracking and understanding human behavior, these streams of data lack information about the actual experiences of those individuals generating the data.…

Conventional surveillance systems for monitoring infectious diseases, such as influenza, face challenges due to shortage of skilled healthcare professionals, remoteness of communities and absence of communication infrastructures.…

Machine Learning · Computer Science 2018-11-28 Oguzhan Gencoglu , Miikka Ermes

Knowledge of the severity of an influenza outbreak is crucial for informing and monitoring appropriate public health responses, both during and after an epidemic. However, case-fatality, case-intensive care admission and…

A prompt public health response to a new epidemic relies on the ability to monitor and predict its evolution in real time as data accumulate. The 2009 A/H1N1 outbreak in the UK revealed pandemic data as noisy, contaminated, potentially…

H1N1 influenza causes substantial seasonal illness and was the subtype of the 2009 influenza pandemic. Precise measures of antigenic distance between the vaccine and circulating virus strains help researchers design influenza vaccines with…

Populations and Evolution · Quantitative Biology 2012-04-30 Keyao Pan , Krystina C. Subieta , Michael W. Deem

Amidst the COVID-19 pandemic, travel restrictions have emerged as crucial interventions for mitigating the spread of the virus. In this study, we enhance the predictive capabilities of our model, Sequence-to-Sequence Epidemic Attention…

Physics and Society · Physics 2023-11-14 Yukang Jiang , Ting Tian , Huajun Xie , Hailiang Guo , Xueqin Wang

In this manuscript, we use meteorological information in Galicia (Spain) to propose a novel approach to predict the incidence of influenza. Our approach extends the GLS methods in the multivariate framework to functional regression models…

The evolution of the hemagglutinin amino acids sequences of Influenza A virus is studied by a method based on an informational metrics, originally introduced by Rohlin for partitions in abstract probability spaces. This metrics does not…

Populations and Evolution · Quantitative Biology 2015-06-03 Raffaella Burioni , Riccardo Scalco , Mario Casartelli

Forecasting the hospitalizations caused by the Influenza virus is vital for public health planning so that hospitals can be better prepared for an influx of patients. Many forecasting methods have been used in real-time during the Influenza…

Machine Learning · Computer Science 2022-06-22 Majd Al Aawar , Ajitesh Srivastava

A central challenge in every field of biology is to use existing measurements to predict the outcomes of future experiments. In this work, we consider the wealth of antibody inhibition data against variants of the influenza virus. Due to…

Quantitative Methods · Quantitative Biology 2023-07-27 Tal Einav , Rong Ma

In this paper, we present a new approach to time series forecasting. Time series data are prevalent in many scientific and engineering disciplines. Time series forecasting is a crucial task in modeling time series data, and is an important…

Machine Learning · Computer Science 2020-01-24 Neo Wu , Bradley Green , Xue Ben , Shawn O'Banion

Health-policy planning requires evidence on the burden that epidemics place on healthcare systems. Multiple, often dependent, datasets provide a noisy and fragmented signal from the unobserved epidemic process including transmission and…

Applications · Statistics 2024-09-11 Alice Corbella , Anne M Presanis , Paul J Birrell , Daniela De Angelis

Influenza occurs every season and occasionally causes pandemics. Despite its low mortality rate, influenza is a major public health concern, as it can be complicated by severe diseases like pneumonia. A fast, accurate and low-cost method to…

Quantitative Methods · Quantitative Biology 2022-08-01 Yanhua Xu , Dominik Wojtczak