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Topology identification and inference of processes evolving over graphs arise in timely applications involving brain, transportation, financial, power, as well as social and information networks. This chapter provides an overview of graph…

Signal Processing · Electrical Eng. & Systems 2025-12-12 Gonzalo Mateos , Yanning Shen , Georgios B. Giannakis , Ananthram Swami

A multigraph is a nonsimple graph which is permitted to have multiple edges, that is, edges that have the same end nodes. We introduce the concept of spanning simplicial complexes $\Delta_s(\mathcal{G})$ of multigraphs $\mathcal{G}$, which…

Algebraic Topology · Mathematics 2017-08-22 Imran Ahmed , Shahid Muhmood

We recall several categories of graphs which are useful for describing homotopy-coherent versions of generalized operads (e.g. cyclic operads, modular operads, properads, and so on), and give new, uniform definitions for their morphisms.…

Category Theory · Mathematics 2025-03-10 Philip Hackney

The notion of homomorphism indistinguishability offers a combinatorial framework for characterizing equivalence relations of graphs, in particular equivalences in counting logics within finite model theory. That is, for certain graph…

Logic in Computer Science · Computer Science 2025-06-26 Georg Schindling

The growing interests and applications of graph learning in diverse domains have propelled the development of a unified model generalizing well across different graphs and tasks, known as the Graph Foundation Model (GFM). Existing research…

Machine Learning · Computer Science 2025-06-17 Trung-Kien Nguyen , Heng Ping , Shixuan Li , Peiyu Zhang , Nikos Kanakaris , Nicholas Kotov , Paul Bogdan

A key feature of neural network architectures is their ability to support the simultaneous interaction among large numbers of units in the learning and processing of representations. However, how the richness of such interactions trades off…

A theory of $\infty$-properads is developed, extending both the Joyal-Lurie $\infty$-categories and the Cisinski-Moerdijk-Weiss $\infty$-operads. Every connected wheel-free graph generates a properad, giving rise to the graphical category…

Algebraic Topology · Mathematics 2020-07-03 Philip Hackney , Marcy Robertson , Donald Yau

For a set-endofunctor $F$, we extend the notion of universal $F$-coalgebras to $F$-graphs. These generalized coalgebras are models for various types of graphs, such as (un)directed (hyper)graphs, relational structures or fuzzy graphs. The…

Combinatorics · Mathematics 2015-08-11 Christian Jäkel

Textual graphs are ubiquitous in real-world applications, featuring rich text information with complex relationships, which enables advanced research across various fields. Textual graph representation learning aims to generate…

Machine Learning · Computer Science 2024-08-22 Wenbin Hu , Huihao Jing , Qi Hu , Haoran Li , Yangqiu Song

The graph structure is a commonly used data storage mode, and it turns out that the low-dimensional embedded representation of nodes in the graph is extremely useful in various typical tasks, such as node classification, link prediction ,…

Social and Information Networks · Computer Science 2020-08-03 Xing Li , Wei Wei , Xiangnan Feng , Xue Liu , Zhiming Zheng

This work introduces the concept of \emph{upper-critical graphs}, in a complementary way of the conventional (lower)critical graphs: an element $x$ of a graph $G$ is called \emph{critical} if $\chi(G-x)<\chi(G)$. It is said that $G$ is a…

Combinatorics · Mathematics 2011-04-05 Jose Antonio Martin H

This document develops general concepts useful for extracting knowledge embedded in large graphs or datasets that have pair-wise relationships, such as cause-effect-type relations. Almost no underlying assumptions are made, other than that…

Machine Learning · Computer Science 2019-02-22 Linas Vepstas

Properties of morphisms represented by so-called 'string diagrams' of monoidal categories (and their braided and symmetric derivatives), mainly their resistance in value to isotopic deformation, have made the usage of graphical calculi…

Category Theory · Mathematics 2023-04-10 Vihaan Dheer

A monoid is said to be special if it admits a presentation in which all defining relations are of the form $w = 1$. Groups are familiar examples of special monoids. This article studies the geometric and structural properties of the Cayley…

Group Theory · Mathematics 2021-01-20 Carl-Fredrik Nyberg-Brodda

We describe a category of undirected graphs which comes equipped with a faithful functor into the category of (colored) modular operads. The associated singular functor from modular operads to presheaves is fully faithful, and its essential…

Category Theory · Mathematics 2020-07-03 Philip Hackney , Marcy Robertson , Donald Yau

In this paper, our goal is to characterize two graph classes based on the properties of minimal vertex (edge) separators. We first present a structural characterization of graphs in which every minimal vertex separator is a stable set. We…

Discrete Mathematics · Computer Science 2011-03-16 Mrinal Kumar , Gaurav Maheswari , N. Sadagopan

This is a motivating tutorial introduction to a semantic analysis of programming languages using a graphical language as the representation of terms, and graph rewriting as a representation of reduction rules. We show how the graphical…

Programming Languages · Computer Science 2021-02-05 Dan R. Ghica

The inevitable modality imperfection in real-world scenarios poses significant challenges for Multimodal Sentiment Analysis (MSA). While existing methods tailor reconstruction or joint representation learning strategies to restore missing…

Multimedia · Computer Science 2025-08-05 Hu Zhangfeng , Shi mengxin

What is a time-varying graph, a time-varying topological space, or, more generally, a mathematical structure that evolves over time? In this work, we lay the foundations for a general theory of temporal data by introducing categories of…

Category Theory · Mathematics 2026-04-22 Benjamin Merlin Bumpus , James Fairbanks , Martti Karvonen , Wilmer Leal , Frédéric Simard

The language of graph theory, or network science, has proven to be an exceptional tool for addressing myriad problems in neuroscience. Yet, the use of networks is predicated on a critical simplifying assumption: that the quintessential unit…

Neurons and Cognition · Quantitative Biology 2016-01-14 Chad Giusti , Robert Ghrist , Danielle S. Bassett
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