English
Related papers

Related papers: Functorial Approach to Graph and Hypergraph Theory

200 papers

We study rewriting for equational theories in the context of symmetric monoidal categories where there is a separable Frobenius monoid on each object. These categories, also called hypergraph categories, are increasingly relevant: Frobenius…

Logic in Computer Science · Computer Science 2018-01-04 Fabio Zanasi

This is an introduction to graph theory, from a geometric and analytic viewpoint. A finite graph $X$ is described by its adjacency matrix $d\in M_N(0,1)$, which can be thought of as being a kind of discrete Laplacian, and we first discuss…

Quantum Algebra · Mathematics 2024-10-23 Teo Banica

String diagrams are a powerful tool for reasoning about composite structures in symmetric monoidal categories. By representing string diagrams as graphs, equational reasoning can be done automatically by double-pushout rewriting. !-graphs…

Logic in Computer Science · Computer Science 2016-02-22 Aleks Kissinger , Vladimir Zamdzhiev

A new heuristic based on vertex invariants is developed to rapidly distinguish non-isomorphic graphs to a desired level of accuracy. The method is applied to sample subgraphs from an E.coli protein interaction network, and as a probe for…

Quantitative Methods · Quantitative Biology 2009-11-13 Kim Baskerville , Maya Paczuski

The aim of this thesis is to present an extension to the string graphs of Dixon, Duncan and Kissinger that allows the finite representation of certain infinite families of graphs and graph rewrite rules, and to demonstrate that a logic can…

Logic in Computer Science · Computer Science 2014-04-01 Alexander Merry

Multi-graph learning is crucial for extracting meaningful signals from collections of heterogeneous graphs. However, effectively integrating information across graphs with differing topologies, scales, and semantics, often in the absence of…

Machine Learning · Computer Science 2026-02-02 Zahra Moslemi , Ziyi Liang , Norbert Fortin , Babak Shahbaba

Knowledge graph embedding involves learning representations of entities -- the vertices of the graph -- and relations -- the edges of the graph -- such that the resulting representations encode the known factual information represented by…

Machine Learning · Computer Science 2023-03-21 Thomas Gebhart , Jakob Hansen , Paul Schrater

We demonstrate that graph-based models are fully capable of representing higher-order interactions, and have a long history of being used for precisely this purpose. This stands in contrast to a common claim in the recent literature on…

Physics and Society · Physics 2026-02-20 Tiago P. Peixoto , Leto Peel , Thilo Gross , Manlio De Domenico

As a crucial step in extractive document summarization, learning cross-sentence relations has been explored by a plethora of approaches. An intuitive way is to put them in the graph-based neural network, which has a more complex structure…

Computation and Language · Computer Science 2020-04-28 Danqing Wang , Pengfei Liu , Yining Zheng , Xipeng Qiu , Xuanjing Huang

Edge-weighted graphs play an important role in the theory of Robinsonian matrices and similarity theory, particularly via the concept of level graphs, that is, graphs obtained from an edge-weighted graph by removing all sufficiently light…

In this paper we develop a framework to study observability for uniform hypergraphs. Hypergraphs, being extensions of graphs, allow edges to connect multiple nodes and unambiguously represent multi-way relationships which are ubiquitous in…

Dynamical Systems · Mathematics 2023-09-19 Joshua Pickard , Amit Surana , Anthony Bloch , Indika Rajapakse

The notion of term graph encodes a refinement of inductively generated syntax in which regard is paid to the the sharing and discard of subterms. Inductively generated syntax has an abstract expression in terms of initial algebras for…

Logic in Computer Science · Computer Science 2011-10-17 Richard Garner

The syntactic categories of categorial grammar formalisms are structured units made of smaller, indivisible primitives, bound together by the underlying grammar's category formation rules. In the trending approach of constructive…

Computation and Language · Computer Science 2023-01-24 Konstantinos Kogkalidis , Michael Moortgat

The presented work focuses on problems from determinant theory, set theory and topology. The term graph is the binding element that connects these problems. Graphs are distinguished by their geometrical simplicity, which helps in showing…

History and Overview · Mathematics 2024-12-24 Ágnes Cseh

Joint modeling of multiview graphs with a common set of nodes between views and auxiliary predictors is an essential, yet less explored, area in statistical methodology. Traditional approaches often treat graphs in different views as…

Methodology · Statistics 2026-03-24 Sharmistha Guha , Jose Rodriguez-Acosta , Ivo Dinov

Cellular sheaves equip graphs with a "geometrical" structure by assigning vector spaces and linear maps to nodes and edges. Graph Neural Networks (GNNs) implicitly assume a graph with a trivial underlying sheaf. This choice is reflected in…

Machine Learning · Computer Science 2023-01-09 Cristian Bodnar , Francesco Di Giovanni , Benjamin Paul Chamberlain , Pietro Liò , Michael M. Bronstein

Counterfactual examples have emerged as an effective approach to produce simple and understandable post-hoc explanations. In the context of graph classification, previous work has focused on generating counterfactual explanations by…

Machine Learning · Computer Science 2023-07-28 Carlo Abrate , Giulia Preti , Francesco Bonchi

We define the notion of affine rigidity of a hypergraph and prove a variety of fundamental results for this notion. First, we show that affine rigidity can be determined by the rank of a specific matrix which implies that affine rigidity is…

Computational Geometry · Computer Science 2013-08-14 Steven J. Gortler , Craig Gotsman , Ligang Liu , Dylan P. Thurston

Let $\mathcal C$ be a category with finite colimits, and let $(\mathcal E,\mathcal M)$ be a factorisation system on $\mathcal C$ with $\mathcal M$ stable under pushouts. Writing $\mathcal C;\mathcal M^{\mathrm{op}}$ for the symmetric…

Category Theory · Mathematics 2017-03-30 Brendan Fong

By applying simplification operations to categories of multigraphs, several natural graph operations are shown to demonstrate categorical issues. The replacement of an undirected edge with a directed cycle for digraphs admits both a left…

Category Theory · Mathematics 2024-03-21 Will Grilliette