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Scientific inference is often undermined by the vast but rarely explored "multiverse" of defensible modelling choices, which can generate results as variable as the phenomena under study. We introduce RobustiPy, an open-source Python…

Methodology · Statistics 2026-05-20 Daniel Valdenegro , Jiani Yan , Duiyi Dai , Charles Rahal

A fundamental task in the analysis of datasets with many variables is screening for associations. This can be cast as a multiple testing task, where the objective is achieving high detection power while controlling type I error. We consider…

Methodology · Statistics 2021-09-01 Nikolaos Ignatiadis , Wolfgang Huber

This paper presents the HiPart package, an open-source native python library that provides efficient and interpret-able implementations of divisive hierarchical clustering algorithms. HiPart supports interactive visualizations for the…

Machine Learning · Statistics 2023-05-02 Panagiotis Anagnostou , Sotiris Tasoulis , Vassilis Plagianakos , Dimitris Tasoulis

There are numerous approaches to building analysis applications across the high-energy physics community. Among them are Python-based, or at least Python-driven, analysis workflows. We aim to ease the adoption of a Python-based analysis…

Computational Physics · Physics 2018-04-25 David Lange

Global hypothesis tests are a useful tool in the context of, e.g, clinical trials, genetic studies or meta analyses, when researchers are not interested in testing individual hypotheses, but in testing whether none of the hypotheses is…

Methodology · Statistics 2017-09-05 Andreas Futschik , Thomas Taus , Sonja Zehetmayer

Flaky tests obstruct software development, and studying and proposing mitigations against them has therefore become an important focus of software engineering research. To conduct sound investigations on test flakiness, it is crucial to…

Software Engineering · Computer Science 2023-05-09 Martin Gruber , Gordon Fraser

The synthpop package for R https://www.synthpop.org.uk provides tools to allow data custodians to create synthetic versions of confidential microdata that can be distributed with fewer restrictions than the original. The synthesis can be…

Computation · Statistics 2021-11-16 Gillian M Raab , Beata Nowok , Chris Dibben

We present pytest-inline, the first inline testing framework for Python. We recently proposed inline tests to make it easier to test individual program statements. But, there is no framework-level support for developers to write inline…

Software Engineering · Computer Science 2023-05-24 Yu Liu , Zachary Thurston , Alan Han , Pengyu Nie , Milos Gligoric , Owolabi Legunsen

bayesian_pyhf is a Python package that allows for the parallel Bayesian and frequentist evaluation of multi-channel binned statistical models. The Python library pyhf is used to build such models according to the HistFactory framework and…

Computation · Statistics 2023-12-13 Matthew Feickert , Lukas Heinrich , Malin Horstmann

Hyperparameter optimization is crucial to achieving high performance in deep learning. On top of the performance, other criteria such as inference time or memory requirement often need to be optimized due to some practical reasons. This…

Artificial Intelligence · Computer Science 2023-05-16 Shuhei Watanabe

As data are generated more and more from multiple disparate sources, multiview data sets, where each sample has features in distinct views, have ballooned in recent years. However, no comprehensive package exists that enables…

In general, randomness tests included in a test suite are not independent of each other. This renders it difficult to fix a rational criterion through the whole test suite with an explicit significance level. In this paper, we focus on the…

Statistics Theory · Mathematics 2019-08-21 Atsushi Iwasaki

This paper presents FauxPy, a fault localization tool for Python programs. FauxPy supports seven well-known fault localization techniques in four families: spectrum-based, mutation-based, predicate switching, and stack trace fault…

Software Engineering · Computer Science 2024-04-30 Mohammad Rezaalipour , Carlo A. Furia

We study the problem of multiple hypothesis testing for multidimensional data when inter-correlations are present. The problem of multiple comparisons is common in many applications. When the data is multivariate and correlated, existing…

Statistics Theory · Mathematics 2015-06-02 Mahdis Azadbakhsh , Xin Gao , Hanna Jankowski

The HistFactory p.d.f. template is per-se independent of its implementation in ROOT and it is useful to be able to run statistical analysis outside of the ROOT, RooFit, RooStats framework. pyhf is a pure-Python implementation of that…

High Energy Physics - Experiment · Physics 2022-11-30 Matthew Feickert , Lukas Heinrich , Giordon Stark

We introduce PyPulse, a Python package for imputation of biosignals in both clinical and wearable sensor settings. Missingness is commonplace in these settings and can arise from multiple causes, such as insecure sensor attachment or data…

Machine Learning · Computer Science 2024-12-10 Kevin Gao , Maxwell A. Xu , James M. Rehg , Alexander Moreno

In this article, we consider the problem of simultaneous testing of hypotheses when the individual test statistics are not necessarily independent. Specifically, we consider the problem of simultaneous testing of point null hypotheses…

Statistics Theory · Mathematics 2018-07-17 Prasenjit Ghosh , Arijit Chakrabarti

We propose a simple multivariate normality test based on Kac-Bernstein's characterization, which can be conducted by utilising existing statistical independence tests for sums and differences of data samples. We also perform its empirical…

Methodology · Statistics 2023-12-27 Povilas Daniušis

The problem of multiple hypothesis testing arises when there are more than one hypothesis to be tested simultaneously for statistical significance. This is a very common situation in many data mining applications. For instance, assessing…

Machine Learning · Statistics 2009-06-30 Sami Hanhijärvi , Kai Puolamäki , Gemma C. Garriga

In applied settings, tests of hypothesis where a nuisance parameter is only identifiable under the alternative often reduces into one of Testing One Hypothesis Multiple times (TOHM). Specifically, a fine discretization of the space of the…

Methodology · Statistics 2022-04-06 Sara Algeri , David A. van Dyk