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We present approximation algorithms for the following NP-hard optimization problems related to bottleneck spanning trees in metric spaces. 1. The disjoint bottleneck spanning tree problem: Given $n$ pairs of points in a metric space, find…

Computational Geometry · Computer Science 2021-11-11 Ahmad Biniaz , Anil Maheshwari , Michiel Smid

Given a persistence diagram with $n$ points, we give an algorithm that produces a sequence of $n$ persistence diagrams converging in bottleneck distance to the input diagram, the $i$th of which has $i$ distinct (weighted) points and is a…

Computational Geometry · Computer Science 2020-12-04 Donald R. Sheehy , Siddharth Sheth

Treedepth is a central parameter to algorithmic graph theory. The current state-of-the-art in computing and approximating treedepth consists of a $2^{O(k^2)} n$-time exact algorithm and a polynomial-time $O(\text{OPT} \log^{3/2}…

Computational Complexity · Computer Science 2025-07-21 Édouard Bonnet , Daniel Neuen , Marek Sokołowski

We present a polynomial time dynamic programming algorithm for optimal partitions in the shortest path metric induced by a tree. This resolves, among other things, the exact complexity status of the optimal partition problems in one…

Data Structures and Algorithms · Computer Science 2012-12-17 Marek Karpinski , Andrzej Lingas , Dzmitry Sledneu

The graph is one of the most widely used mathematical structures in engineering and science because of its representational power and inherent ability to demonstrate the relationship between objects. The objective of this work is to…

Data Structures and Algorithms · Computer Science 2021-01-01 Shri Prakash Dwivedi

This paper proposes a new general technique for maximal subgraph enumeration which we call proximity search, whose aim is to design efficient enumeration algorithms for problems that could not be solved by existing frameworks. To support…

Data Structures and Algorithms · Computer Science 2021-08-19 Alessio Conte , Andrea Marino , Roberto Grossi , Takeaki Uno , Luca Versari

Imagine that unlabelled tokens are placed on the edges of a graph, such that no two tokens are placed on incident edges. A token can jump to another edge if the edges having tokens remain independent. We study the problem of determining the…

Data Structures and Algorithms · Computer Science 2018-12-14 Nicolas Bousquet , Tatsuhiko Hatanaka , Takehiro Ito , Moritz Mühlenthaler

This paper give a simple linear-time algorithm that, given a weighted digraph, finds a spanning tree that simultaneously approximates a shortest-path tree and a minimum spanning tree. The algorithm provides a continuous trade-off: given the…

Data Structures and Algorithms · Computer Science 2015-06-02 Samir Khuller , Balaji Raghavachari , Neal E. Young

Canonical distances such as Euclidean distance often fail to capture the appropriate relationships between items, subsequently leading to subpar inference and prediction. Many algorithms have been proposed for automated learning of suitable…

Machine Learning · Statistics 2020-08-24 Tyler M. Tomita , Joshua T. Vogelstein

Edit distances between merge trees of scalar fields have many applications in scientific visualization, such as ensemble analysis, feature tracking or symmetry detection. In this paper, we propose branch mappings, a novel approach to the…

Computational Geometry · Computer Science 2022-08-12 Florian Wetzels , Heike Leitte , Christoph Garth

Hypergraph width measures are a class of hypergraph invariants important in studying the complexity of constraint satisfaction problems (CSPs). We present a general exact exponential algorithm for a large variety of these measures. A…

Computational Complexity · Computer Science 2011-06-24 Lukas Moll , Siamak Tazari , Marc Thurley

The complexity of the maximum common connected subgraph problem in partial $k$-trees is still not fully understood. Polynomial-time solutions are known for degree-bounded outerplanar graphs, a subclass of the partial $2$-trees. On the other…

Data Structures and Algorithms · Computer Science 2017-08-10 Nils Kriege , Florian Kurpicz , Petra Mutzel

We study the problem of approximating all-pair distances in a weighted undirected graph with differential privacy, introduced by Sealfon [Sea16]. Given a publicly known undirected graph, we treat the weights of edges as sensitive…

Data Structures and Algorithms · Computer Science 2025-04-07 Michael Dinitz , Chenglin Fan , Jingcheng Liu , Jalaj Upadhyay , Zongrui Zou

We prove the following result about approximating the maximum independent set in a graph. Informally, we show that any approximation algorithm with a ``non-trivial'' approximation ratio (as a function of the number of vertices of the input…

Data Structures and Algorithms · Computer Science 2023-07-06 Parinya Chalermsook , Fedor Fomin , Thekla Hamm , Tuukka Korhonen , Jesper Nederlof , Ly Orgo

We present efficient algorithms for computing a maximum agreement forest (MAF) of a pair of multifurcating (nonbinary) rooted trees. Our algorithms match the running times of the currently best algorithms for the binary case. The size of an…

Data Structures and Algorithms · Computer Science 2013-05-03 Chris Whidden , Robert G. Beiko , Norbert Zeh

Distance measures between graphs are important primitives for a variety of learning tasks. In this work, we describe an unsupervised, optimal transport based approach to define a distance between graphs. Our idea is to derive…

Computational Engineering, Finance, and Science · Computer Science 2024-04-11 Michael Scholkemper , Damin Kühn , Gerion Nabbefeld , Simon Musall , Björn Kampa , Michael T. Schaub

There are several tools available to infer phylogenetic trees, which depict the evolutionary relationships among biological entities such as viral and bacterial strains in infectious outbreaks, or cancerous cells in tumor progression trees.…

Data Structures and Algorithms · Computer Science 2023-12-22 António Pedro Branco , Cátia Vaz , Alexandre P. Francisco

Fast exact algorithms are known for Hamiltonian paths in undirected and directed bipartite graphs through elegant though involved algorithms that are quite different from each other. We devise algorithms that are simple and similar to each…

Data Structures and Algorithms · Computer Science 2025-12-10 V. Arvind , Srijan Chakraborty , Samir Datta , Asif Khan

Simplifying graphs is a very applicable problem in numerous domains, especially in computational geometry. Given a geometric graph and a threshold, the minimum-complexity graph simplification asks for computing an alternative graph of…

Computational Geometry · Computer Science 2021-11-05 Omrit Filtser , Majid Mirzanezhad , Carola Wenk

Persistence diagrams, combining geometry and topology for an effective shape description used in pattern recognition, have already proven to be an effective tool for shape representation with respect to a certainfiltering function.…

Algebraic Topology · Mathematics 2018-12-26 Alessia Angeli , Massimo Ferri , Ivan Tomba