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Many quantum algorithms for numerical linear algebra assume black-box access to a block-encoding of the matrix of interest, which is a strong assumption when the matrix is not sparse. Kernel matrices, which arise from discretizing a kernel…

Quantum Physics · Physics 2022-12-14 Quynh T. Nguyen , Bobak T. Kiani , Seth Lloyd

We develop and implement in this paper a fast sparse assembly algorithm, the fundamental operation which creates a compressed matrix from raw index data. Since it is often a quite demanding and sometimes critical operation, it is of…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-04-28 Stefan Engblom , Dimitar Lukarski

We present a parallel hierarchical solver for general sparse linear systems on distributed-memory machines. For large-scale problems, this fully algebraic algorithm is faster and more memory-efficient than sparse direct solvers because it…

Numerical Analysis · Mathematics 2017-12-21 Chao Chen , Hadi Pouransari , Sivasankaran Rajamanickam , Erik G. Boman , Eric Darve

This article presents a fast solver for the dense "frontal" matrices that arise from the multifrontal sparse elimination process of 3D elliptic PDEs. The solver relies on the fact that these matrices can be efficiently represented as a…

Numerical Analysis · Computer Science 2015-12-08 Amirhossein Aminfar , Sivaram Ambikasaran , Eric Darve

A fundamental question that shrouds the emergence of massively parallel computing (MPC) platforms is how can the additional power of the MPC paradigm be leveraged to achieve faster algorithms compared to classical parallel models such as…

Data Structures and Algorithms · Computer Science 2018-05-09 Sepehr Assadi , Xiaorui Sun , Omri Weinstein

In numerical linear algebra, considerable effort has been devoted to obtaining faster algorithms for linear systems whose underlying matrices exhibit structural properties. A prominent success story is the method of generalized nested…

Data Structures and Algorithms · Computer Science 2023-10-26 Sally Dong , Gramoz Goranci , Lawrence Li , Sushant Sachdeva , Guanghao Ye

The minimum degree algorithm is one of the most widely-used heuristics for reducing the cost of solving large sparse systems of linear equations. It has been studied for nearly half a century and has a rich history of bridging techniques…

Data Structures and Algorithms · Computer Science 2023-04-11 Robert Cummings , Matthew Fahrbach , Animesh Fatehpuria

In this paper we consider the problem of estimating simultaneously low-rank and row-wise sparse matrices from nested linear measurements where the linear operator consists of the product of a linear operator $\mathcal{W}$ and a matrix…

Statistics Theory · Mathematics 2016-03-22 Sohail Bahmani , Justin Romberg

Sparse matrix vector multiplication (SpMV) is one of the most common operations in scientific and high-performance applications, and is often responsible for the application performance bottleneck. While the sparse matrix representation has…

Mathematical Software · Computer Science 2018-05-31 Shizhao Chen , Jianbin Fang , Donglin Chen , Chuanfu Xu , Zheng Wang

Sparse coding--that is, modelling data vectors as sparse linear combinations of basis elements--is widely used in machine learning, neuroscience, signal processing, and statistics. This paper focuses on the large-scale matrix factorization…

Machine Learning · Statistics 2010-02-11 Julien Mairal , Francis Bach , Jean Ponce , Guillermo Sapiro

The Multilevel Monte Carlo (MLMC) method has proven to be an effective variance-reduction statistical method for Uncertainty Quantification (UQ) in Partial Differential Equation (PDE) models, combining model computations at different levels…

Mathematical Software · Computer Science 2023-05-24 Santiago Badia , Jerrad Hampton , Javier Principe

In the present work, we investigate the computational efficiency afforded by higher-order finite-element discretization of the saddle-point formulation of orbital-free density functional theory. We first investigate the robustness of viable…

Computational Physics · Physics 2015-05-30 Phani Motamarri , Mrinal Iyer , Jaroslaw Knap , Vikram Gavini

Sparse Matrix-Matrix multiplication is a key kernel that has applications in several domains such as scientific computing and graph analysis. Several algorithms have been studied in the past for this foundational kernel. In this paper, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-01-10 Mehmet Deveci , Christian Trott , Sivasankaran Rajamanickam

We present a versatile open-source framework designed to facilitate efficient, numerically-tailored Matrix-Matrix Multiplications (MMMs). The framework offers two primary contributions: first, a fine-tuned, automated pipeline for arithmetic…

Mathematical Software · Computer Science 2024-06-06 Louis Ledoux , Marc Casas

In this work, we present a method to exponentiate non-sparse indefinite low-rank matrices on a quantum computer. Given an operation for accessing the elements of the matrix, our method allows singular values and associated singular vectors…

Quantum Physics · Physics 2018-01-31 Patrick Rebentrost , Adrian Steffens , Seth Lloyd

In this paper, we investigate power-constrained sensing matrix design in a sparse Gaussian linear dimensionality reduction framework. Our study is carried out in a single--terminal setup as well as in a multi--terminal setup consisting of…

Information Theory · Computer Science 2015-10-28 Amirpasha Shirazinia , Subhrakanti Dey

The $\ell$FEM MATLAB package provides a simple, efficient, and flexible implementation of isoparametric finite elements in bulk domains and on surfaces. The finite element matrix assemblies are based on MATLAB's paged operators and…

Numerical Analysis · Mathematics 2026-05-15 Balázs Kovács , Michael Lantelme

Existing block Kaczmarz methods face challenges in balancing computational efficiency and convergence for large sparse linear systems with scattered nonzero patterns, due to costly partitioning strategies and non-orthogonal projections. In…

Numerical Analysis · Mathematics 2025-06-24 Yu-Fang Liang , Hou-Biao Li

We study the completion of approximately low rank matrices with entries missing not at random (MNAR). In the context of typical large-dimensional statistical settings, we establish a framework for the performance analysis of the nuclear…

Information Theory · Computer Science 2024-01-02 Agostino Capponi , Mihailo Stojnic

We consider the problem of developing an efficient multi-threaded implementation of the matrix-vector multiplication algorithm for sparse matrices with structural symmetry. Matrices are stored using the compressed sparse row-column format…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-05-18 Vicente H. F. Batista , George O. Ainsworth , Fernando L. B. Ribeiro
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