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Ordinary Differential Equations (ODE) are used throughout science where the capture of rates of change in states is sought. While both pieces of commercial and open software exist to study such systems, their efficient and accurate usage…

Mathematical Software · Computer Science 2018-03-20 Edwin Tye , Tom Finnie , Ian Hall , Steve Leach

Spectroscopy is a central pillar of materials characterization, providing useful information on properties like structure, composition, or excited state dynamics of a system. However, many spectroscopic techniques present challenges in…

Materials Science · Physics 2026-04-09 Amalya C. Johnson , Chris Fajardo , Leena Sansguiri , Weike Ye , Steven B. Torrisi

Resolving transient atomic configurations in non-crystalline or dynamic environments remains a fundamental bottleneck in the physical sciences. While X-ray absorption spectroscopy (XAS) is a premier probe of local structure, inverting…

Materials Science · Physics 2026-03-31 Suyang Zhong , Boying Huang , Pengwei Xu , Fanjie Xu , Yuhao Zhao , Jun Cheng , Fujie Tang , Weinan E , Zhong-Qun Tian

We present a new solver for coupled nonlinear elliptic partial differential equations (PDEs). The solver is based on pseudo-spectral collocation with domain decomposition and can handle one- to three-dimensional problems. It has three…

General Relativity and Quantum Cosmology · Physics 2009-11-07 Harald P. Pfeiffer , Lawrence E. Kidder , Mark A. Scheel , Saul A. Teukolsky

This paper announces the availability of a fixed point toolbox for the Matlab compatible software package Octave. This toolbox is released under the GNU Public License, and can be used to model the losses in algorithms implemented in…

Mathematical Software · Computer Science 2007-05-23 David Bateman , Laurent Mazet , Veronique Buzenac-Settineri , Markus Muck

OpenFMO framework, an open-source software (OSS) platform for Fragment Molecular Orbital (FMO) method, is extended to multi-physics simulations (MPS). After reviewing the several FMO implementations on distributed computer environments, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2009-09-29 Toshiya Takami , Jun Maki , Jun'ichi Ooba , Yuuichi Inadomi , Hiroaki Honda , Ryutaro Susukita , Koji Inoue , Taizo Kobayashi , Rie Nogita , Mutsumi Aoyagi

Semidefinite programs are an important class of convex optimization problems. It can be solved efficiently by SDP solvers in Matlab, such as SeDuMi, SDPT3, DSDP. However, since we are running fixed precision SDP solvers in Matlab, for some…

Optimization and Control · Mathematics 2011-12-30 Feng Guo

We present enhancements to SDPB, an open source, parallelized, arbitrary precision semidefinite program solver designed for the conformal bootstrap. The main enhancement is significantly improved performance and scalability using the…

High Energy Physics - Theory · Physics 2019-09-24 Walter Landry , David Simmons-Duffin

We introduce SDPB: an open-source, parallelized, arbitrary-precision semidefinite program solver, designed for the conformal bootstrap. SDPB significantly outperforms less specialized solvers and should enable many new computations. As an…

High Energy Physics - Theory · Physics 2015-02-10 David Simmons-Duffin

Neural integral equations are deep learning models based on the theory of integral equations, where the model consists of an integral operator and the corresponding equation (of the second kind) which is learned through an optimization…

Numerical Analysis · Mathematics 2025-11-14 Emanuele Zappala

In this paper we describe simode: Separable Integral Matching for Ordinary Differential Equations. The statistical methodologies applied in the package focus on several minimization procedures of an integral-matching criterion function,…

Computation · Statistics 2018-10-09 Rami Yaari , Itai Dattner

We propose an efficient numerical method for a non-selfadjoint Steklov eigenvalue problem. The Lagrange finite element is used for discretization. The convergence is proved using the spectral perturbation theory for compact operators. The…

Numerical Analysis · Mathematics 2018-04-10 Juan Liu , Jiguang Sun , Tiara Turner

This paper addresses the positive semi-definite procrustes problem (PSDP). The PSDP corresponds to a least squares problem over the set of symmetric and semi-definite positive matrices. These kinds of problems appear in many applications…

Numerical Analysis · Mathematics 2019-08-20 Harry F. Oviedo

Partitioning for load balancing is a crucial first step to parallelize any type of computation. In this work, we propose SGORP, a new spatial partitioning method based on Subgradient Optimization, to solve the $d$-dimensional Rectilinear…

Data Structures and Algorithms · Computer Science 2023-10-05 Muhammed Fatih Balin , Xiaojing An , Abdurrahman Yaşar , Ümit V. Çatalyürek

A large part of modern research, especially in the broad field of complex systems, relies on the numerical integration of PDEs, with and without stochastic noise. This is usually done with eiher in-house made codes or external packages like…

Computational Physics · Physics 2024-10-03 Fernando Caballero

We look for spectral type differential equations for the generalized Jacobi polynomials and for the Sobolev-Laguerre polynomials. We use a method involving computeralgebra packages like Maple and Mathematica and we will give some…

Classical Analysis and ODEs · Mathematics 2007-05-23 Roelof Koekoek

In recent years we provided numerical methods based on pseudospectral collocation for computing the Floquet multipliers of different types of delay equations, with the goal of studying the stability of their periodic solutions. The latest…

Numerical Analysis · Mathematics 2022-03-29 Dimitri Breda , Davide Liessi , Rossana Vermiglio

The intrusive (sample-free) spectral stochastic finite element method (SSFEM) is a powerful numerical tool for solving stochastic partial differential equations (PDEs). However, it is not widely adopted in academic and industrial…

Numerical Analysis · Mathematics 2022-09-20 Ajit Desai

Spectral measures arise in numerous applications such as quantum mechanics, signal processing, resonances, and fluid stability. Similarly, spectral decompositions (pure point, absolutely continuous and singular continuous) often…

Spectral Theory · Mathematics 2021-03-02 Matthew John Colbrook

We present and publish a Mathematica package, which can be used to automatically obtain any numerical MSSM input parameter from SUSY spectrum generators, which follow the SLHA standard, like Spheno, Softsusy, Suseflav or Suspect. The…

High Energy Physics - Phenomenology · Physics 2015-06-17 Peter Marquard , Nikolai Zerf