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This paper presents a practical approach for the optimization of topological simplification, a central pre-processing step for the analysis and visualization of scalar data. Given an input scalar field f and a set of "signal" persistence…

Machine Learning · Computer Science 2024-08-22 Mohamed Kissi , Mathieu Pont , Joshua A. Levine , Julien Tierny

Data noising is an effective technique for regularizing neural network models. While noising is widely adopted in application domains such as vision and speech, commonly used noising primitives have not been developed for discrete…

Machine Learning · Computer Science 2017-03-09 Ziang Xie , Sida I. Wang , Jiwei Li , Daniel Lévy , Aiming Nie , Dan Jurafsky , Andrew Y. Ng

Many modern datasets are large and carry complex structural relationships. Graph-based methods have traditionally been used to represent networked data, modeling individual elements as nodes and pairwise interactions as edges. Furthermore,…

Signal Processing · Electrical Eng. & Systems 2026-05-25 Flavia Petruso , Maria Giulia Preti , Dimitri Van De Ville

In this paper, we review widely used statistical analysis frameworks for data defined along cortical and subcortical surfaces that have been developed in last two decades. The cerebral cortex has the topology of a 2D highly convoluted…

Neurons and Cognition · Quantitative Biology 2022-03-15 Moo K. Chung , Jamie L. Hanson , Seth D. Pollak

Learning a graph topology to reveal the underlying relationship between data entities plays an important role in various machine learning and data analysis tasks. Under the assumption that structured data vary smoothly over a graph, the…

Machine Learning · Statistics 2023-08-23 Xingyue Pu , Tianyue Cao , Xiaoyun Zhang , Xiaowen Dong , Siheng Chen

Topological data analysis refers to approaches for systematically and reliably computing abstract ``shapes'' of complex data sets. There are various applications of topological data analysis in life and data sciences, with growing interest…

Mesoscale and Nanoscale Physics · Physics 2023-07-26 Daniel Leykam , Dimitris G. Angelakis

Inferring network topology from smooth signals is a significant problem in data science and engineering. A common challenge in real-world scenarios is the availability of only partially observed nodes. While some studies have considered…

Machine Learning · Computer Science 2025-07-08 Chuansen Peng , Hanning Tang , Zhiguo Wang , Xiaojing Shen

Linear diagrams are an effective way to visualize set-based data by representing elements as columns and sets as rows with one or more horizontal line segments, whose vertical overlaps with other rows indicate set intersections and their…

Computational Geometry · Computer Science 2022-08-18 Alexander Dobler , Martin Nöllenburg

The goal of this paper is to establish the fundamental tools to analyze signals defined over a topological space, i.e. a set of points along with a set of neighborhood relations. This setup does not require the definition of a metric and…

Signal Processing · Electrical Eng. & Systems 2020-10-28 Sergio Barbarossa , Stefania Sardellitti

In this paper, a method is proposed to solve the problem of monotone smoothing splines using general linear systems. This problem, also called monotone control theoretic splines, has been solved only when the curve generator is modeled by…

Systems and Control · Computer Science 2013-08-08 Masaaki Nagahara , Clyde F. Martin

Density map is an effective visualization technique for depicting the scalar field distribution in 2D space. Conventional methods for constructing density maps are mainly based on Euclidean distance, limiting their applicability in urban…

Human-Computer Interaction · Computer Science 2021-03-08 Zezheng Feng , Haotian Li , Wei Zeng , Shuang-Hua Yang , Huamin Qu

Graph vertex ordering is widely employed in spatial data analysis, especially in urban analytics, where street graphs serve as spatial discretization for modeling and simulation. It is also crucial for visualization, as many methods require…

Graphics · Computer Science 2025-10-23 Karelia Salinas , Victor Barella , Thales Viera , Luis Gustavo Nonato

Topological Data Analysis (TDA) has been praised by researchers for its ability to capture intricate shapes and structures within data. TDA is considered robust in handling noisy and high-dimensional datasets, and its interpretability is…

Machine Learning · Computer Science 2024-01-10 Funmilola Mary Taiwo , Umar Islambekov , Cuneyt Gurcan Akcora

In this paper, we are interested in learning the underlying graph structure behind training data. Solving this basic problem is essential to carry out any graph signal processing or machine learning task. To realize this, we assume that the…

Machine Learning · Computer Science 2018-05-08 Sundeep Prabhakar Chepuri , Sijia Liu , Geert Leus , Alfred O. Hero

The complexity and non-Euclidean structure of graph data hinder the development of data augmentation methods similar to those in computer vision. In this paper, we propose a feature augmentation method for graph nodes based on topological…

Machine Learning · Computer Science 2021-04-07 Rui Song , Fausto Giunchiglia , Ke Zhao , Hao Xu

Transformers are designed for discrete tokens, yet many real-world signals are continuous processes observed through noisy sampling. Discrete tokenizations (raw values, patches, finite differences) can be brittle in low signal-to-noise…

Machine Learning · Computer Science 2026-01-21 Griffin Kearney

Charts provide visual representations of data and are widely used for analyzing information, addressing queries, and conveying insights to others. Various chart-related downstream tasks have emerged recently, such as question-answering and…

Computation and Language · Computer Science 2024-03-15 Ahmed Masry , Mehrad Shahmohammadi , Md Rizwan Parvez , Enamul Hoque , Shafiq Joty

Finding important edges in a graph is a crucial problem for various research fields, such as network epidemics, signal processing, machine learning, and sensor networks. In this paper, we tackle the problem based on sampling theory on…

Signal Processing · Electrical Eng. & Systems 2024-07-16 Kenta Yanagiya , Koki Yamada , Yasuo Katsuhara , Tomoya Takatani , Yuichi Tanaka

Computational topology is an area that revisits topological problems from an algorithmic point of view, and develops topological tools for improved algorithms. We survey results in computational topology that are concerned with graphs drawn…

Computational Geometry · Computer Science 2017-09-06 Éric Colin de Verdière

The goal of this paper is to introduce pooling strategies for simplicial convolutional neural networks. Inspired by graph pooling methods, we introduce a general formulation for a simplicial pooling layer that performs: i) local aggregation…

Signal Processing · Electrical Eng. & Systems 2022-10-12 Domenico Mattia Cinque , Claudio Battiloro , Paolo Di Lorenzo