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Preliminary diagnosis of fungal infections can rely on microscopic examination. However, in many cases, it does not allow unambiguous identification of the species by microbiologist due to their visual similarity. Therefore, it is usually…

Computer Vision and Pattern Recognition · Computer Science 2020-09-09 Bartosz Zieliński , Agnieszka Sroka-Oleksiak , Dawid Rymarczyk , Adam Piekarczyk , Monika Brzychczy-Włoch

Traditionally, diagnosis and treatment of fungal infections in humans depend heavily on face-to-face consultations or examinations made by specialized laboratory scientists known as mycologists. In many cases, such as the recent…

Image and Video Processing · Electrical Eng. & Systems 2021-09-16 Camilo Javier Pineda Sopo , Farshid Hajati , Soheila Gheisari

Automated recognition and classification of bacteria species from microscopic images have significant importance in clinical microbiology. Bacteria classification is usually carried out manually by biologists using different shapes and…

Quantitative Methods · Quantitative Biology 2019-12-19 Muhammed Talo

Microorganisms play a vital role in human life. Therefore, microorganism detection is of great significance to human beings. However, the traditional manual microscopic detection methods have the disadvantages of long detection cycle, low…

Computer Vision and Pattern Recognition · Computer Science 2022-04-12 Pingli Ma , Chen Li , Md Mamunur Rahaman , Yudong Yao , Jiawei Zhang , Shuojia Zou , Xin Zhao , Marcin Grzegorzek

Microtubule networks (MTs) are a component of a cell that may indicate the presence of various chemical compounds and can be used to recognize properties such as treatment resistance. Therefore, the classification of MT images is of great…

Image and Video Processing · Electrical Eng. & Systems 2020-12-23 Aleksei Shpilman , Dmitry Boikiy , Marina Polyakova , Daniel Kudenko , Anton Burakov , Elena Nadezhdina

Sepsis is a life-threatening condition which requires rapid diagnosis and treatment. Traditional microbiological methods are time-consuming and expensive. In response to these challenges, deep learning algorithms were developed to identify…

Objectives. Sustainable management of plant diseases is an open challenge which has relevant economic and environmental impact. Optimal strategies rely on human expertise for field scouting under favourable conditions to assess the current…

Computer Vision and Pattern Recognition · Computer Science 2021-12-22 Alessandro Benfenati , Paola Causin , Roberto Oberti , Giovanni Stefanello

Addressing plant diseases and pests is critical for enhancing crop production and preventing economic losses. Recent advances in artificial intelligence (AI), machine learning (ML), and deep learning (DL) have significantly improved the…

Computer Vision and Pattern Recognition · Computer Science 2025-08-13 Saptarshi Banerjee , Tausif Mallick , Amlan Chakroborty , Himadri Nath Saha , Nityananda T. Takur

Molecular and morphological characters, as important parts of biological taxonomy, are contradictory but need to be integrated. Organism's image recognition and bioinformatics are emerging and hot problems nowadays but with a gap between…

Computer Vision and Pattern Recognition · Computer Science 2022-06-29 Jiewen Xiao , Wenbin Liao , Ming Zhang , Jing Wang , Jianxin Wang , Yihua Yang

In this paper, a semi-automatic annotation of bacteria genera and species from DIBaS dataset is implemented using clustering and thresholding algorithms. A Deep learning model is trained to achieve the semantic segmentation and…

Image and Video Processing · Electrical Eng. & Systems 2022-08-24 Chethan Reddy G. P. , Pullagurla Abhijith Reddy , Vidyashree R. Kanabur , Deepu Vijayasenan , Sumam S. David , Sreejith Govindan

Fine-grained classification of microscopic image data with limited samples is an open problem in computer vision and biomedical imaging. Deep learning based vision systems mostly deal with high number of low-resolution images, whereas…

Computer Vision and Pattern Recognition · Computer Science 2020-10-07 Mengran Fan , Tapabrata Chakrabort , Eric I-Chao Chang , Yan Xu , Jens Rittscher

Identification of plant disease is usually done through visual inspection or during laboratory examination which causes delays resulting in yield loss by the time identification is complete. On the other hand, complex deep learning models…

Computer Vision and Pattern Recognition · Computer Science 2021-02-10 Nisar Ahmed , Hafiz Muhammad Shahzad Asif , Gulshan Saleem

High-quality labeled datasets are essential for deep learning. Traditional manual annotation methods are not only costly and inefficient but also pose challenges in specialized domains where expert knowledge is needed. Self-supervised…

Computer Vision and Pattern Recognition · Computer Science 2023-11-16 Zhaocong liu , Fa Zhang , Lin Cheng , Huanxi Deng , Xiaoyan Yang , Zhenyu Zhang , Chichun Zhou

FungiCLEF 2024 addresses the fine-grained visual categorization (FGVC) of fungi species, with a focus on identifying poisonous species. This task is challenging due to the size and class imbalance of the dataset, subtle inter-class…

Computer Vision and Pattern Recognition · Computer Science 2024-07-11 Christopher Chiu , Maximilian Heil , Teresa Kim , Anthony Miyaguchi

Microorganisms such as bacteria and fungi play essential roles in many application fields, like biotechnique, medical technique and industrial domain. Microorganism counting techniques are crucial in microorganism analysis, helping…

Image and Video Processing · Electrical Eng. & Systems 2021-09-30 Jiawei Zhang , Chen Li , Md Mamunur Rahaman , Yudong Yao , Pingli Ma , Jinghua Zhang , Xin Zhao , Tao Jiang , Marcin Grzegorzek

Machine learning has become an appealing signature-less approach to detect and classify malware because of its ability to generalize to never-before-seen samples and to handle large volumes of data. While traditional feature-based…

Cryptography and Security · Computer Science 2024-04-30 Daniel Gibert , Carles Mateu , Jordi Planes , Quan Le

Analysis of microscopy images is one important tool in many fields of biomedical research, as it allows the quantification of a multitude of parameters at the cellular level. However, manual counting of these images is both tiring and…

Computer Vision and Pattern Recognition · Computer Science 2013-11-13 P. A Nogueira

Orthopoxvirus infections must be accurately classified from medical pictures for an easy and early diagnosis and epidemic prevention. The necessity for automated and scalable solutions is highlighted by the fact that traditional diagnostic…

Computer Vision and Pattern Recognition · Computer Science 2025-06-09 Alejandro Puente-Castro , Enrique Fernandez-Blanco , Daniel Rivero , Andres Molares-Ulloa

The rapid advances in Deep Learning (DL) techniques have enabled rapid detection, localisation, and recognition of objects from images or videos. DL techniques are now being used in many applications related to agriculture and farming.…

Computer Vision and Pattern Recognition · Computer Science 2021-03-03 A S M Mahmudul Hasan , Ferdous Sohel , Dean Diepeveen , Hamid Laga , Michael G. K. Jones

Deep learning is currently the most important branch of machine learning, with applications in speech recognition, computer vision, image classification, and medical imaging analysis. Plant recognition is one of the areas where image…

Computer Vision and Pattern Recognition · Computer Science 2022-09-08 Thiru Siddharth , Bhupendra Singh Kirar , Dheeraj Kumar Agrawal
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