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Disease name recognition and normalization, which is generally called biomedical entity linking, is a fundamental process in biomedical text mining. Recently, neural joint learning of both tasks has been proposed to utilize the mutual…

Computation and Language · Computer Science 2021-04-22 Shogo Ujiie , Hayate Iso , Shuntaro Yada , Shoko Wakamiya , Eiji Aramaki

An extreme learning machine (ELM) can be regarded as a two stage feed-forward neural network (FNN) learning system which randomly assigns the connections with and within hidden neurons in the first stage and tunes the connections with…

Machine Learning · Computer Science 2014-01-27 Shaobo Lin , Xia Liu , Jian Fang , Zongben Xu

Predicting the occurrence of links is a fundamental problem in networks. In the link prediction problem we are given a snapshot of a network and would like to infer which interactions among existing members are likely to occur in the near…

Social and Information Networks · Computer Science 2010-11-19 L. Backstrom , J. Leskovec

While neural network-based models have achieved impressive performance on a large body of NLP tasks, the generalization behavior of different models remains poorly understood: Does this excellent performance imply a perfect generalization…

Computation and Language · Computer Science 2020-01-14 Jinlan Fu , Pengfei Liu , Qi Zhang , Xuanjing Huang

Motivation: Biomedical named-entity normalization involves connecting biomedical entities with distinct database identifiers in order to facilitate data integration across various fields of biology. Existing systems for biomedical named…

Computation and Language · Computer Science 2023-10-24 Zainab Awan , Tim Kahlke , Peter Ralph , Paul Kennedy

In this paper we examine learning methods combining the Random Neural Network, a biologically inspired neural network and the Extreme Learning Machine that achieve state of the art classification performance while requiring much shorter…

Neural and Evolutionary Computing · Computer Science 2016-09-27 Athanasios Vlontzos

Graph embedding based on random-walks supports effective solutions for many graph-related downstream tasks. However, the abundance of embedding literature has made it increasingly difficult to compare existing methods and to identify…

Machine Learning · Computer Science 2021-10-26 Zexi Huang , Arlei Silva , Ambuj Singh

Relation extraction (RE) aims to identify the semantic relations between named entities in text. Recent years have witnessed it raised to the document level, which requires complex reasoning with entities and mentions throughout an entire…

Computation and Language · Computer Science 2020-09-23 Difeng Wang , Wei Hu , Ermei Cao , Weijian Sun

We introduce globally normalized convolutional neural networks for joint entity classification and relation extraction. In particular, we propose a way to utilize a linear-chain conditional random field output layer for predicting entity…

Computation and Language · Computer Science 2018-08-08 Heike Adel , Hinrich Schütze

Conventional deep reinforcement learning methods are sample-inefficient and usually require a large number of training trials before convergence. Since such methods operate on an unconstrained action set, they can lead to useless actions. A…

Artificial Intelligence · Computer Science 2021-03-04 Daiki Kimura , Subhajit Chaudhury , Akifumi Wachi , Ryosuke Kohita , Asim Munawar , Michiaki Tatsubori , Alexander Gray

Recurrent neural network (RNN), as a powerful contextual dependency modeling framework, has been widely applied to scene labeling problems. However, this work shows that directly applying traditional RNN architectures, which unfolds a 2D…

Computer Vision and Pattern Recognition · Computer Science 2017-03-29 Qiangui Huang , Weiyue Wang , Kevin Zhou , Suya You , Ulrich Neumann

We present a joint model for entity-level relation extraction from documents. In contrast to other approaches - which focus on local intra-sentence mention pairs and thus require annotations on mention level - our model operates on entity…

Computation and Language · Computer Science 2021-12-06 Markus Eberts , Adrian Ulges

Multimodal entity linking (MEL) aims to link ambiguous mentions within multimodal contexts to corresponding entities in a multimodal knowledge base. Most existing approaches to MEL are based on representation learning or vision-and-language…

Computer Vision and Pattern Recognition · Computer Science 2024-12-17 Zhiwei Hu , Víctor Gutiérrez-Basulto , Ru Li , Jeff Z. Pan

Specialized entity linking (EL) models are well-trained at mapping mentions to unique knowledge base (KB) entities according to a given context. However, specialized EL models struggle to disambiguate long-tail entities due to their limited…

Computation and Language · Computer Science 2025-09-29 Amy Xin , Yunjia Qi , Zijun Yao , Fangwei Zhu , Kaisheng Zeng , Xu Bin , Lei Hou , Juanzi Li

Entity Recognition (ER) within a text is a fundamental exercise in Natural Language Processing, enabling further depending tasks such as Knowledge Extraction, Text Summarisation, or Keyphrase Extraction. An entity consists of single words…

Computation and Language · Computer Science 2021-06-14 Andreas Waldis , Luca Mazzola

Entity-Relationship (E-R) Search is a complex case of Entity Search where the goal is to search for multiple unknown entities and relationships connecting them. We assume that a E-R query can be decomposed as a sequence of sub-queries each…

Information Retrieval · Computer Science 2018-10-09 Pedro Saleiro , Natasa Milic-Frayling , Eduarda Mendes Rodrigues , Carlos Soares

Named Entity Recognition (NER) serves as a foundational component in many natural language processing (NLP) pipelines. However, current NER models typically output a single predicted label sequence without any accompanying measure of…

Computation and Language · Computer Science 2026-01-27 Matthew Singer , Srijan Sengupta , Karl Pazdernik

Distantly supervised relation extraction has been widely used to find novel relational facts from plain text. To predict the relation between a pair of two target entities, existing methods solely rely on those direct sentences containing…

Computation and Language · Computer Science 2017-09-15 Wenyuan Zeng , Yankai Lin , Zhiyuan Liu , Maosong Sun

Entity Alignment (EA) seeks to identify and match corresponding entities across different Knowledge Graphs (KGs), playing a crucial role in knowledge fusion and integration. Embedding-based entity alignment (EA) has recently gained…

Computation and Language · Computer Science 2024-12-09 Xuan Chen , Tong Lu , Zhichun Wang

This study proposed a knowledge graph entity extraction and relationship reasoning algorithm based on a graph neural network, using a graph convolutional network and graph attention network to model the complex structure in the knowledge…

Computation and Language · Computer Science 2024-11-26 Junliang Du , Guiran Liu , Jia Gao , Xiaoxuan Liao , Jiacheng Hu , Linxiao Wu