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Protein inverse folding is a fundamental problem in bioinformatics, aiming to recover the amino acid sequences from a given protein backbone structure. Despite the success of existing methods, they struggle to fully capture the intricate…

Machine Learning · Computer Science 2024-12-13 Chenglin Wang , Yucheng Zhou , Zijie Zhai , Jianbing Shen , Kai Zhang

In the three decades since its introduction, resource selection analysis (RSA) has become a widespread method for analyzing spatial patterns of animal relocations obtained from telemetry studies. Recently, mechanistic home range models have…

Populations and Evolution · Quantitative Biology 2007-05-23 P. R. Moorcroft , A. H. Barnett

3D referring expression comprehension (3DREC) and segmentation (3DRES) have overlapping objectives, indicating their potential for collaboration. However, existing collaborative approaches predominantly depend on the results of one task to…

Computer Vision and Pattern Recognition · Computer Science 2024-07-11 Zhipeng Qian , Yiwei Ma , Zhekai Lin , Jiayi Ji , Xiawu Zheng , Xiaoshuai Sun , Rongrong Ji

We consider the problem of efficiently approximating and encoding high-dimensional data sampled from a probability distribution $\rho$ in $\mathbb{R}^D$, that is nearly supported on a $d$-dimensional set $\mathcal{M}$ - for example…

Machine Learning · Statistics 2017-07-19 Wenjing Liao , Mauro Maggioni

Classical multidimensional scaling (MDS) is a method for visualizing high-dimensional point clouds by mapping to low-dimensional Euclidean space. This mapping is defined in terms of eigenfunctions of a matrix of interpoint dissimilarities.…

Applications · Statistics 2008-11-11 Persi Diaconis , Sharad Goel , Susan Holmes

Partitionings (or segmentations) divide a given domain into disjoint connected regions whose union forms again the entire domain. Multi-dimensional partitionings occur, for example, when analyzing parameter spaces of simulation models,…

Human-Computer Interaction · Computer Science 2024-10-28 Marina Evers , Lars Linsen

In this work we introduce a structured signaling game, an extension of the classical signaling game with a similarity structure between meanings in the context, along with a variant of the Rational Speech Act (RSA) framework which we call…

Artificial Intelligence · Computer Science 2023-05-18 Emil Carlsson , Devdatt Dubhashi

Multivariate analysis of fMRI data has benefited substantially from advances in machine learning. Most recently, a range of probabilistic latent variable models applied to fMRI data have been successful in a variety of tasks, including…

In real-world applications with large state and action spaces, reinforcement learning (RL) typically employs function approximations to represent core components like the policies, value functions, and dynamics models. Although powerful…

Machine Learning · Computer Science 2026-01-29 Chenxiao Gao , Haotian Sun , Na Li , Dale Schuurmans , Bo Dai

Dimensionality reduction is a common method for analyzing and visualizing high-dimensional data. However, reasoning dynamically about the results of a dimensionality reduction is difficult. Dimensionality-reduction algorithms use complex…

Human-Computer Interaction · Computer Science 2018-11-30 Marco Cavallo , Çağatay Demiralp

Guided depth super-resolution (GDSR) reconstructs HR depth maps from LR inputs with HR RGB guidance. Existing methods either model each modality independently or rely on computationally expensive attention mechanisms with quadratic…

Computer Vision and Pattern Recognition · Computer Science 2026-05-13 Chen Wu , Ling Wang , Zhuoran Zheng , Xiangyu Chen , Jingyuan Xia , Weidong Jiang , Jiantao Zhou

Multidimensional Scaling (MDS) is a classic technique that seeks vectorial representations for data points, given the pairwise distances between them. However, in recent years, data are usually collected from diverse sources or have…

Computer Vision and Pattern Recognition · Computer Science 2017-08-29 Song Bai , Xiang Bai , Longin Jan Latecki , Qi Tian

Domain generalized semantic segmentation is an essential computer vision task, for which models only leverage source data to learn the capability of generalized semantic segmentation towards the unseen target domains. Previous works…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Guanlong Jiao , Chenyangguang Zhang , Haonan Yin , Yu Mo , Biqing Huang , Hui Pan , Yi Luo , Jingxian Liu

Neuroscience and artificial intelligence (AI) both face the challenge of interpreting high-dimensional neural data, where the comparative analysis of such data is crucial for revealing shared mechanisms and differences between these complex…

Neurons and Cognition · Quantitative Biology 2025-09-16 Yiqing Bo , Ansh Soni , Sudhanshu Srivastava , Meenakshi Khosla

Understanding the behavior and evolution of a dynamical many-body system by analyzing patterns in their experimentally captured images is a promising method relevant for a variety of living and non-living self-assembled systems. The arrays…

Dimensionality reduction is often used as an initial step in data exploration, either as preprocessing for classification or regression or for visualization. Most dimensionality reduction techniques to date are unsupervised; they do not…

Machine Learning · Statistics 2020-06-17 Jake S. Rhodes , Adele Cutler , Guy Wolf , Kevin R. Moon

Dimension reduction and data visualization aim to project a high-dimensional dataset to a low-dimensional space while capturing the intrinsic structures in the data. It is an indispensable part of modern data science, and many dimensional…

Machine Learning · Statistics 2022-10-26 Rong Ma , Eric D. Sun , James Zou

Extracting interpretable equations from observational datasets to describe complex natural phenomena is one of the core goals of artificial intelligence. This field is known as symbolic regression (SR). In recent years, Transformer-based…

Machine Learning · Computer Science 2026-01-26 Da Li , Junping Yin , Jin Xu , Xinxin Li , Juan Zhang

Reduced-rank linear discriminant analysis (RRLDA) is a foundational method of dimension reduction for classification that has been useful in a wide range of applications. The goal is to identify an optimal subspace to project the…

Computation · Statistics 2026-02-12 Jocelyn T. Chi

The use of local detectors and descriptors in typical computer vision pipelines work well until variations in viewpoint and appearance change become extreme. Past research in this area has typically focused on one of two approaches to this…

Computer Vision and Pattern Recognition · Computer Science 2022-03-25 Udit Singh Parihar , Aniket Gujarathi , Kinal Mehta , Satyajit Tourani , Sourav Garg , Michael Milford , K. Madhava Krishna