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Semi-supervised learning algorithms typically construct a weighted graph of data points to represent a manifold. However, an explicit graph representation is problematic for neural networks operating in the online setting. Here, we propose…

Machine Learning · Computer Science 2019-10-22 Alexander Genkin , Anirvan M. Sengupta , Dmitri Chklovskii

Structure based ligand discovery is one of the most successful approaches for augmenting the drug discovery process. Currently, there is a notable shift towards machine learning (ML) methodologies to aid such procedures. Deep learning has…

Machine Learning · Statistics 2018-06-12 Marta M. Stepniewska-Dziubinska , Piotr Zielenkiewicz , Pawel Siedlecki

Linear mixed models (LMMs) are used extensively to model dependecies of observations in linear regression and are used extensively in many application areas. Parameter estimation for LMMs can be computationally prohibitive on big data.…

Machine Learning · Statistics 2019-03-08 Zilong Tan , Kimberly Roche , Xiang Zhou , Sayan Mukherjee

One of the main questions in the theory of normal surface singularities is to understand the relations between their geometry and topology. The lattice cohomology is an important tool in the study of topological properties of a plumbed…

Geometric Topology · Mathematics 2013-10-15 Tamás László

We compute the cohomology of the right generalised projective Stiefel manifolds and use it to find bounds on the rank of the complementary bundle for certain vector bundles. Further the cohomology computations are also used to find bounds…

Algebraic Topology · Mathematics 2019-08-15 Samik Basu , B. Subhash

Supervised machine learning can be used to predict properties of string geometries with previously unknown features. Using the complete intersection Calabi-Yau (CICY) threefold dataset as a theoretical laboratory for this investigation, we…

High Energy Physics - Theory · Physics 2019-07-10 Kieran Bull , Yang-Hui He , Vishnu Jejjala , Challenger Mishra

In this paper, we propose a fully differentiable pipeline for estimating accurate dense correspondences between 3D point clouds. The proposed pipeline is an extension and a generalization of the functional maps framework. However, instead…

Computer Vision and Pattern Recognition · Computer Science 2020-10-27 Riccardo Marin , Marie-Julie Rakotosaona , Simone Melzi , Maks Ovsjanikov

We consider four dimensional heterotic compactifications on smooth elliptic Calabi-Yau threefolds. Using spectral cover techniques, we study bundle cohomology groups corresponding to charged matter multiplets. The analysis shows that in…

High Energy Physics - Theory · Physics 2010-02-03 Duiliu-Emanuel Diaconescu , Gheorghe Ionesei

We adapt previous research on category theory and topological unsupervised learning to develop a functorial perspective on manifold learning, also known as nonlinear dimensionality reduction. We first characterize manifold learning…

Machine Learning · Computer Science 2022-11-04 Dan Shiebler

In this paper, we propose a point cloud classification method based on graph neural network and manifold learning. Different from the conventional point cloud analysis methods, this paper uses manifold learning algorithms to embed point…

Computer Vision and Pattern Recognition · Computer Science 2020-10-19 Dinghao Yang , Wei Gao

Complex supermanifold structures being deformations of the exterior algebra of a holomorphic vector bundle, have been parametrized by orbits of a group on non-abelian cohomology by P. Green. For the case of odd dimension $4$ and $5$ an…

Complex Variables · Mathematics 2016-01-28 Matthias Kalus

This work proposes an algorithm for explicitly constructing a pair of neural networks that linearize and reconstruct an embedded submanifold, from finite samples of this manifold. Our such-generated neural networks, called Flattening…

Machine Learning · Computer Science 2023-09-11 Michael Psenka , Druv Pai , Vishal Raman , Shankar Sastry , Yi Ma

Biological networks provide insight into the complex organization of biological processes in a cell at the system level. They are an effective tool for understanding the comprehensive map of functional interactions, finding the functional…

Molecular Networks · Quantitative Biology 2017-09-14 Somaye Hashemifar

This paper proposes a novel topological learning framework that integrates networks of different sizes and topology through persistent homology. Such challenging task is made possible through the introduction of a computationally efficient…

Neurons and Cognition · Quantitative Biology 2023-01-30 Tananun Songdechakraiwut , Moo K. Chung

The empirical success of deep learning is often attributed to deep networks' ability to exploit hierarchical structure in data, constructing increasingly complex features across layers. Yet despite substantial progress in deep learning…

Machine Learning · Computer Science 2026-01-28 Yunwei Ren , Yatin Dandi , Florent Krzakala , Jason D. Lee

In the study of the rational cohomology of Hilbert schemes of points on a smooth surface, it is particularly interesting to understand the characteristic classes of the tautological bundles and the tangent bundle. In this note we pursue…

Algebraic Geometry · Mathematics 2007-05-23 Samuel Boissiere , Marc A. Nieper-Wisskirchen

We use machine learning to classify examples of braids (or flat braids) as trivial or non-trivial. Our ML takes form of supervised learning using neural networks (multilayer perceptrons). When they achieve good results in classification, we…

Geometric Topology · Mathematics 2023-07-25 Alexei Lisitsa , Mateo Salles , Alexei Vernitski

We investigate the formal principle for holomorphic line bundles on neighborhoods of an analytic subset of a complex manifold mainly in the case where it can be realized as an open subset of a compact K\"ahler manifold. Our approach…

Complex Variables · Mathematics 2026-01-26 Takayuki Koike

Multilayer networks provide a powerful framework for modeling complex systems that capture different types of interactions between the same set of entities across multiple layers. Core-periphery detection involves partitioning the nodes of…

Physics and Society · Physics 2025-05-08 Kai Bergermann , Francesco Tudisco

In the past decade, deep learning became the prevalent methodology for predictive modeling thanks to the remarkable accuracy of deep neural networks in tasks such as computer vision and natural language processing. Meanwhile, the structure…

Optimization and Control · Mathematics 2025-09-16 Joey Huchette , Gonzalo Muñoz , Thiago Serra , Calvin Tsay
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