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We advocate the Loop-of-stencil-reduce pattern as a means of simplifying the implementation of data-parallel programs on heterogeneous multi-core platforms. Loop-of-stencil-reduce is general enough to subsume map, reduce, map-reduce,…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-09-16 M. Aldinucci , M. Danelutto , M. Drocco , P. Kilpatrick , C. Misale , G. Peretti Pezzi , M. Torquati

Analyzing large-scale performance logs from GPU profilers often requires terabytes of memory and hours of runtime, even for basic summaries. These constraints prevent timely insight and hinder the integration of performance analytics into…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-27 Ankur Lahiry , Ayush Pokharel , Seth Ockerman , Amal Gueroudji , Line Pouchard , Tanzima Z. Islam

Recurrent Neural Networks (RNNs) are a class of machine learning algorithms used for applications with time-series and sequential data. Recently, there has been a strong interest in executing RNNs on embedded devices. However, difficulties…

Neural and Evolutionary Computing · Computer Science 2020-03-23 Nesma M. Rezk , Madhura Purnaprajna , Tomas Nordström , Zain Ul-Abdin

Stencil computation constitutes a cornerstone of scientific computing, serving as a critical kernel in domains ranging from fluid dynamics to weather simulation. While stencil computations are conventionally regarded as memory-bound and…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-03 Qiqi Gu , Chenpeng Wu , Heng Shi , Jianguo Yao , Haibing Guan

The high-performance computing (HPC) community has adopted incentive structures to motivate reproducible research, with major conferences awarding badges to papers that meet reproducibility requirements. Yet, many papers do not meet such…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-01 Valérie Hayot-Sasson , Nathaniel Hudson , André Bauer , Maxime Gonthier , Ian Foster , Kyle Chard

Hardware performance monitoring (HPM) is a crucial ingredient of performance analysis tools. While there are interfaces like LIKWID, PAPI or the kernel interface perf\_event which provide HPM access with some additional features, many…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-10-12 Thomas Röhl , Jan Eitzinger , Georg Hager , Gerhard Wellein

This paper describes a new benchmark tool, Spatter, for assessing memory system architectures in the context of a specific category of indexed accesses known as gather and scatter. These types of operations are increasingly used to express…

Performance · Computer Science 2020-07-09 Patrick Lavin , Jeffrey Young , Jason Riedy , Richard Vuduc , Aaron Vose , Dan Ernst

This paper reports on the design and implementation of the HPC performance monitoring system deployed to continuously monitor performance metrics of all jobs on the HPC systems at the Max Planck Computing and Data Facility (MPCDF). Thereby…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-09-27 Luka Stanisic , Klaus Reuter

Automatic code generation is frequently used to create implementations of algorithms specifically tuned to particular hardware and application parameters. The code generation process involves the selection of adequate code transformations,…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-08 Dominik Ernst , Markus Holzer , Georg Hager , Matthias Knorr , Gerhard Wellein

Stencils represent a class of computational patterns where an output grid point depends on a fixed shape of neighboring points in an input grid. Stencil computations are prevalent in scientific applications engaging a significant portion of…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-24 Jesmin Jahan Tithi , Fabrizio Petrini , Hongbo Rong , Andrei Valentin , Carl Ebeling

Reproducibility is widely acknowledged as a fundamental principle in scientific research. Currently, the scientific community grapples with numerous challenges associated with reproducibility, often referred to as the ''reproducibility…

Software Engineering · Computer Science 2024-09-16 Benjamin A. Antunes , David R. C. Hill

Optimizing the performance of stencil algorithms has been the subject of intense research over the last two decades. Since many stencil schemes have low arithmetic intensity, most optimizations focus on increasing the temporal data access…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-10-19 Tareq Malas , Georg Hager , Hatem Ltaief , David Keyes

Research processes often rely on high-performance computing (HPC), but HPC is often seen as antithetical to "reproducibility": one would have to choose between software that achieves high performance, and software that can be deployed in a…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-16 Ludovic Courtès

Powerful detectors at modern experimental facilities routinely collect data at multiple GB/s. Online analysis methods are needed to enable the collection of only interesting subsets of such massive data streams, such as by explicitly…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-23 Rafael Vescovi , Ryan Chard , Nickolaus Saint , Ben Blaiszik , Jim Pruyne , Tekin Bicer , Alex Lavens , Zhengchun Liu , Michael E. Papka , Suresh Narayanan , Nicholas Schwarz , Kyle Chard , Ian Foster

Although modern supercomputers are composed of multicore machines, one can find scientists that still execute their legacy applications which were developed to monocore cluster where memory hierarchy is dedicated to a sole core. The main…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-10-31 Alexandre Sena , Aline Nascimento , Cristina Boeres , Vinod E. F. Rebello , André Bulcão

In this work, we present a novel inner product design for stochastic computing. Stochastic computing is an emerging computing technique, that encodes a number in the probability of observing a one in a random bit stream. This leads to…

Emerging Technologies · Computer Science 2018-11-21 Werner Haselmayr , Daniel Wiesinger , Michael Lunglmayr

In this document, we develop a structured approach to the management of HPC resilience based on the concept of resilience-based design patterns. A design pattern is a general repeatable solution to a commonly occurring problem. We identify…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-12-30 Saurabh Hukerikar , Christian Engelmann

Statisticians increasingly face the problem to reconsider the adaptability of classical inference techniques. In particular, divers types of high-dimensional data structures are observed in various research areas; disclosing the boundaries…

Statistics Theory · Mathematics 2017-06-09 Paavo Sattler , Markus Pauly

Reconstructing system-level behavior from silicon traces is a critical problem in post-silicon validation of System-on-Chip designs. Current industrial practice in this area is primarily manual, depending on collaborative insights of the…

Hardware Architecture · Computer Science 2020-05-07 Yuting Cao , Hao Zheng , Sandip Ray , Jin Yang

Interest in many-core architectures applied to real time selections is growing in High Energy Physics (HEP) experiments. In this paper we describe performance measurements of many-core devices when applied to a typical HEP online task: the…

Instrumentation and Detectors · Physics 2014-11-25 A. Gianelle , S. Amerio , D. Bastieri , M. Corvo , W. Ketchum , T. Liu , A. Lonardo , D. Lucchesi , S. Poprocki , R. Rivera , L. Tosoratto , P. Vicini , P. Wittich