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The focus of this paper is two fold. Firstly, we present a logical approach to graph modification problems such as minimum node deletion, edge deletion, edge augmentation problems by expressing them as an expression in first order (FO)…

Logic in Computer Science · Computer Science 2017-11-09 Kona Harshita , Sounaka Mishra , Renjith. P , N. Sadagopan

We present a new fast all-pairs shortest path algorithm for unweighted graphs. In breadth-first search which is said to representative and fast in unweighted graphs, the average number of accesses to adjacent vertices (expressed by…

Data Structures and Algorithms · Computer Science 2019-08-20 Yasuo Yamane , Kenichi Kobayashi

We propose new succinct representations of ordinal trees, which have been studied extensively. It is known that any $n$-node static tree can be represented in $2n + o(n)$ bits and a number of operations on the tree can be supported in…

Data Structures and Algorithms · Computer Science 2010-09-27 Gonzalo Navarro , Kunihiko Sadakane

Given a graph G and a query vertex q, the topic of community search (CS), aiming to retrieve a dense subgraph of G containing q, has gained much attention. Most existing works focus on undirected graphs which overlooks the rich information…

Databases · Computer Science 2023-11-20 Yankai Chen , Jie Zhang , Yixiang Fang , Xin Cao , Irwin King

We provide the first non-trivial result on dynamic breadth-first search (BFS) in external-memory: For general sparse undirected graphs of initially $n$ nodes and O(n) edges and monotone update sequences of either $\Theta(n)$ edge insertions…

Data Structures and Algorithms · Computer Science 2008-02-21 Ulrich Meyer

The suffix tree is arguably the most fundamental data structure on strings: introduced by Weiner (SWAT 1973) and McCreight (JACM 1976), it allows solving a myriad of computational problems on strings in linear time. Motivated by its large…

Data Structures and Algorithms · Computer Science 2026-05-07 Ruben Becker , Davide Cenzato , Travis Gagie , Sung-Hwan Kim , Ragnar Groot Koerkamp , Giovanni Manzini , Nicola Prezza

This note recapitulates an algorithmic observation for ordered Depth-First Search (DFS) in directed graphs that immediately leads to a parallel algorithm with linear speed-up for a range of processors for non-sparse graphs. The note extends…

Data Structures and Algorithms · Computer Science 2013-11-13 Jesper Larsson Träff

We combine two methods for the lossless compression of unlabeled graphs - entropy compressing adjacency lists and computing canonical names for vertices - and solve an ensuing novel optimisation problem: Minimum-Entropy Tree-Extraction…

Data Structures and Algorithms · Computer Science 2026-03-17 Ziad Ismaili Alaoui , Tamio-Vesa Nakajima , Namrata , Sebastian Wild

We consider $m \times s$ matrices (with $m\geq s$) in a real affine subspace of dimension $n$. The problem of finding elements of low rank in such spaces finds many applications in information and systems theory, where low rank is…

Symbolic Computation · Computer Science 2019-07-19 Didier Henrion , Simone Naldi , Mohab Safey El Din

Graph classes of bounded tree rank were introduced recently in the context of the model checking problem for first-order logic of graphs. These graph classes are a common generalization of graph classes of bounded degree and bounded…

Discrete Mathematics · Computer Science 2025-10-08 Jakub Gajarský , Rose McCarty

Large Language Models (LLMs) have demonstrated remarkable improvements in reasoning and planning through increased test-time compute, often by framing problem-solving as a search process. While methods like Monte Carlo Tree Search (MCTS)…

Artificial Intelligence · Computer Science 2025-06-06 Nathan Herr , Tim Rocktäschel , Roberta Raileanu

Efficient methods for storing and querying are critical for scaling high-order n-gram language models to large corpora. We propose a language model based on compressed suffix trees, a representation that is highly compact and can be easily…

Computation and Language · Computer Science 2016-08-17 Ehsan Shareghi , Matthias Petri , Gholamreza Haffari , Trevor Cohn

The suffix array is an efficient data structure for in-memory pattern search. Suffix arrays can also be used for external-memory pattern search, via two-level structures that use an internal index to identify the correct block of suffix…

Data Structures and Algorithms · Computer Science 2013-03-27 Simon Gog , Alistair Moffat , J. Shane Culpepper , Andrew Turpin , Anthony Wirth

We define and study analogs of probabilistic tree embedding and tree cover for directed graphs. We define the notion of a DAG cover of a general directed graph $G$: a small collection $D_1,\dots D_g$ of DAGs so that for all pairs of…

Data Structures and Algorithms · Computer Science 2025-04-16 Sepehr Assadi , Gary Hoppenworth , Nicole Wein

The treedepth of a graph $G$ is the least possible depth of an elimination forest of $G$: a rooted forest on the same vertex set where every pair of vertices adjacent in $G$ is bound by the ancestor/descendant relation. We propose an…

Data Structures and Algorithms · Computer Science 2022-05-06 Wojciech Nadara , Michał Pilipczuk , Marcin Smulewicz

Graph searching is one of the simplest and most widely used tools in graph algorithms. Every graph search method is defined using some particular selection rule, and the analysis of the corresponding vertex orderings can aid greatly in…

Discrete Mathematics · Computer Science 2021-09-07 Matjaž Krnc , Nevena Pivač

Natural language text corpora are often available as sets of syntactically parsed trees. A wide range of expressive tree queries are possible over such parsed trees that open a new avenue in searching over natural language text. They not…

Databases · Computer Science 2012-08-02 Pirooz Chubak , Davood Rafiei

Given a digraph $D$, the Minimum Leaf Out-Branching problem (MinLOB) is the problem of finding in $D$ an out-branching with the minimum possible number of leaves, i.e., vertices of out-degree 0. Gutin, Razgon and Kim (2008) proved that…

Data Structures and Algorithms · Computer Science 2008-08-08 Peter Dankelmann , Gregory Gutin , Eun Jung Kim

Graph plays a vital role in representing entities and their relationships in a variety of fields, such as e-commerce networks, social networks and biological networks. Given two vertices s and t, one of the fundamental problems in graph…

Databases · Computer Science 2021-02-25 Zhengmin Lai , You Peng , Shiyu Yang , Xuemin Lin , Wenjie Zhang

We study the inference of network archaeology in growing random geometric graphs. We consider the root finding problem for a random nearest neighbor tree in dimension $d \in \mathbb{N}$, generated by sequentially embedding vertices…

Probability · Mathematics 2024-11-22 Anna Brandenberger , Cassandra Marcussen , Elchanan Mossel , Madhu Sudan