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In recent years, it has become increasingly common for high performance computers (HPC) to possess some level of heterogeneous architecture - typically in the form of GPU accelerators. In some machines these are isolated within a dedicated…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-10-19 I. Zacharoudiou , J. W. S. McCullough , P. V. Coveney

Modern GPUs are able to perform significantly more arithmetic operations than transfers of a single word to or from global memory. Hence, many GPU kernels are limited by memory bandwidth and cannot exploit the arithmetic power of GPUs.…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-09-13 J. Filipovič , M. Madzin , J. Fousek , L. Matyska

Stochastic simulation techniques employed for the analysis of portfolios of insurance/reinsurance risk, often referred to as `Aggregate Risk Analysis', can benefit from exploiting state-of-the-art high-performance computing platforms. In…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-08-19 A. K. Bahl , O. Baltzer , A. Rau-Chaplin , B. Varghese , A. Whiteway

Multiple matching algorithms are used to locate the occurrences of patterns from a finite pattern set in a large input string. Aho-Corasick and Wu-Manber, two of the most well known algorithms for multiple matching require an increased…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-07-11 Charalampos S. Kouzinopoulos , John-Alexander M. Assael , Themistoklis K. Pyrgiotis , Konstantinos G. Margaritis

GPUs are widely used to accelerate many important classes of workloads today. However, we observe that several important emerging classes of workloads, including simulation engines for deep reinforcement learning and dynamic neural…

Hardware Architecture · Computer Science 2024-01-24 Sankeerth Durvasula , Adrian Zhao , Raymond Kiguru , Yushi Guan , Zhonghan Chen , Nandita Vijaykumar

Main memory column-stores have proven to be efficient for processing analytical queries. Still, there has been much less work in the context of clusters. Using only a single machine poses several restrictions: Processing power and data…

Databases · Computer Science 2017-09-18 Demian Hespe , Martin Weidner , Jonathan Dees , Peter Sanders

For a deep learning model, efficient execution of its computation graph is key to achieving high performance. Previous work has focused on improving the performance for individual nodes of the computation graph, while ignoring the…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-26 Linpeng Tang , Yida Wang , Theodore L. Willke , Kai Li

This work presents a GPU thread mapping approach that allows doing fast parallel stencil-like computations on discrete fractals using their compact representation. The intuition behind is to employ two GPU tensor-core accelerated thread…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-26 Felipe A. Quezada , Cristóbal A. Navarro

This paper explores strategies to transform an existing CPU-based high-performance computational fluid dynamics solver, HyPar, for compressible flow simulations on emerging exascale heterogeneous (CPU+GPU) computing platforms. The…

Computational Engineering, Finance, and Science · Computer Science 2022-12-07 Youngdae Kim , Debojyoti Ghosh , Emil M. Constantinescu , Ramesh Balakrishnan

The Kernel Polynomial Method (KPM) is one of the fast diagonalization methods used for simulations of quantum systems in research fields of condensed matter physics and chemistry. The algorithm has a difficulty to be parallelized on a…

Computational Physics · Physics 2011-05-30 Shixun Zhang , Shinichi Yamagiwa , Masahiko Okumura , Seiji Yunoki

We present a scalable dissipative particle dynamics simulation code, fully implemented on the Graphics Processing Units (GPUs) using a hybrid CUDA/MPI programming model, which achieves 10-30 times speedup on a single GPU over 16 CPU cores…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-12-01 Yu-Hang Tang , George Em Karniadakis

Heterogeneous graph neural networks (HGNNs) have emerged as powerful algorithms for processing heterogeneous graphs (HetGs), widely used in many critical fields. To capture both structural and semantic information in HetGs, HGNNs first…

Hardware Architecture · Computer Science 2024-04-29 Runzhen Xue , Dengke Han , Mingyu Yan , Mo Zou , Xiaocheng Yang , Duo Wang , Wenming Li , Zhimin Tang , John Kim , Xiaochun Ye , Dongrui Fan

In High Energy Physics facilities that provide High Performance Computing environments provide an opportunity to efficiently perform the statistical inference required for analysis of data from the Large Hadron Collider, but can pose…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-09-01 Matthew Feickert , Lukas Heinrich , Giordon Stark , Ben Galewsky

Optimizing charged-particle track reconstruction algorithms is crucial for efficient event reconstruction in Large Hadron Collider (LHC) experiments due to their significant computational demands. Existing track reconstruction algorithms…

Compelling arguments suggest the presence of new physics at energy scales that will be probed by frontier energy colliders over the next decade. Arguments for each of the many flavors of new physics that have been proposed seem much less…

High Energy Physics - Experiment · Physics 2014-11-17 Bruce Knuteson

The LHC experiments are designed to detect large amount of physics events produced with a very high rate. Considering the future upgrades, the data acquisition rate will become even higher and new computing paradigms must be adopted for…

The high degree of parallelism and relatively complicated synchronization mechanisms in GPUs make writing correct kernels difficult. Data races pose one such concurrency correctness challenge, and therefore, effective methods of detecting…

Programming Languages · Computer Science 2021-11-25 Sagnik Dey , Mayant Mukul , Parth Sharma , Swarnendu Biswas

Complex Event Processing (CEP) has emerged as the unifying field for technologies that require processing and correlating distributed data sources in real-time. CEP finds applications in diverse domains, which has resulted in a large number…

Databases · Computer Science 2018-08-31 Marco Bucchi , Alejandro Grez , Cristian Riveros , Martín Ugarte

We present the extension of the Tinker-HP package (Lagard\`ere et al., Chem. Sci., 2018,9, 956-972) to the use of Graphics Processing Unit (GPU) cards to accelerate molecular dynamics simulations using polarizable many-body force fields.…

In the High-Luminosity Large Hadron Collider (HL-LHC), one of the most challenging computational problems is expected to be finding and fitting charged-particle tracks during event reconstruction. The methods currently in use at the LHC are…

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