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Most existing graph visualization methods based on dimension reduction are limited to relatively small graphs due to performance issues. In this work, we propose a novel dimension reduction method for graph visualization, called…

Machine Learning · Computer Science 2023-10-18 Xinyu Li , Yao Xiao , Yuchen Zhou

This paper investigates the theoretical foundations of the t-distributed stochastic neighbor embedding (t-SNE) algorithm, a popular nonlinear dimension reduction and data visualization method. A novel theoretical framework for the analysis…

Machine Learning · Statistics 2022-11-02 T. Tony Cai , Rong Ma

Graph is a ubiquitous representation of data in various research fields, and graph embedding is a prevalent machine learning technique for capturing key features and generating fixed-sized attributes. However, most state-of-the-art graph…

Machine Learning · Computer Science 2024-10-10 Xihan Qin , Cencheng Shen

Parametric embedding methods such as parametric t-SNE (pt-SNE) have been widely adopted for data visualization and out-of-sample data embedding without further computationally expensive optimization or approximation. However, the…

Machine Learning · Computer Science 2018-04-24 Martin Renqiang Min , Hongyu Guo , Dinghan Shen

t-distributed Stochastic Neighborhood Embedding (t-SNE) is a method for dimensionality reduction and visualization that has become widely popular in recent years. Efficient implementations of t-SNE are available, but they scale poorly to…

Machine Learning · Computer Science 2019-02-26 George C. Linderman , Manas Rachh , Jeremy G. Hoskins , Stefan Steinerberger , Yuval Kluger

The t-distributed Stochastic Neighbor Embedding (tSNE) algorithm has become in recent years one of the most used and insightful techniques for the exploratory data analysis of high-dimensional data. tSNE reveals clusters of high-dimensional…

The dimensionality reduction has been widely introduced to use the high-dimensional data for regression, classification, feature analysis, and visualization. As the one technique of dimensionality reduction, a stochastic neighbor embedding…

Computer Vision and Pattern Recognition · Computer Science 2020-12-03 Motoshi Abe , Junichi Miyao , Takio Kurita

Embedding and visualizing large-scale high-dimensional data in a two-dimensional space is an important problem since such visualization can reveal deep insights out of complex data. Most of the existing embedding approaches, however, run on…

Machine Learning · Computer Science 2017-03-06 Minjeong Kim , Minsuk Choi , Sunwoong Lee , Jian Tang , Haesun Park , Jaegul Choo

Graph-based methods are known to be successful in many machine learning and pattern classification tasks. These methods consider semi-structured data as graphs where nodes correspond to primitives (parts, interest points, segments, etc.)…

Computer Vision and Pattern Recognition · Computer Science 2019-01-01 Anjan Dutta , Hichem Sahbi

t-Stochastic Neighbor Embedding (t-SNE) is a non-parametric data visualization method in classical machine learning. It maps the data from the high-dimensional space into a low-dimensional space, especially a two-dimensional plane, while…

Quantum Physics · Physics 2022-02-10 Yoshiaki Kawase , Kosuke Mitarai , Keisuke Fujii

Graph embedding methods transform high-dimensional and complex graph contents into low-dimensional representations. They are useful for a wide range of graph analysis tasks including link prediction, node classification, recommendation and…

Machine Learning · Computer Science 2019-12-03 Bhagya Hettige , Yuan-Fang Li , Weiqing Wang , Wray Buntine

We present GraphTSNE, a novel visualization technique for graph-structured data based on t-SNE. The growing interest in graph-structured data increases the importance of gaining human insight into such datasets by means of visualization.…

Machine Learning · Computer Science 2019-04-24 Yao Yang Leow , Thomas Laurent , Xavier Bresson

Low-dimensional representations, or embeddings, of a graph's nodes facilitate several practical data science and data engineering tasks. As such embeddings rely, explicitly or implicitly, on a similarity measure among nodes, they require…

Machine Learning · Computer Science 2023-01-06 Anton Tsitsulin , Marina Munkhoeva , Davide Mottin , Panagiotis Karras , Ivan Oseledets , Emmanuel Müller

We present a generic framework for spatio-temporal (ST) data modeling, analysis, and forecasting, with a special focus on data that is sparse in both space and time. Our multi-scaled framework is a seamless coupling of two major components:…

Machine Learning · Computer Science 2018-04-04 Bao Wang , Xiyang Luo , Fangbo Zhang , Baichuan Yuan , Andrea L. Bertozzi , P. Jeffrey Brantingham

T-SNE is a well-known approach to embedding high-dimensional data and has been widely used in data visualization. The basic assumption of t-SNE is that the data are non-constrained in the Euclidean space and the local proximity can be…

Machine Learning · Computer Science 2015-08-06 Mian Wang , Dong Wang

Progressive Visual Analytics aims at improving the interactivity in existing analytics techniques by means of visualization as well as interaction with intermediate results. One key method for data analysis is dimensionality reduction, for…

Computer Vision and Pattern Recognition · Computer Science 2016-06-17 Nicola Pezzotti , Boudewijn P. F. Lelieveldt , Laurens van der Maaten , Thomas Höllt , Elmar Eisemann , Anna Vilanova

Dimensionality reduction techniques aim at representing high-dimensional data in low-dimensional spaces to extract hidden and useful information or facilitate visual understanding and interpretation of the data. However, few of them take…

Machine Learning · Computer Science 2022-10-25 Yan Sun , Yi Han , Jicong Fan

In deep neural nets, lower level embedding layers account for a large portion of the total number of parameters. Tikhonov regularization, graph-based regularization, and hard parameter sharing are approaches that introduce explicit biases…

Machine Learning · Computer Science 2020-10-06 Liwei Wu , Shuqing Li , Cho-Jui Hsieh , James Sharpnack

Graph embedding is gaining its popularity for link prediction in complex networks and achieving excellent performance. However, limited work has been done in sparse networks that represent most of real networks. In this paper, we propose a…

Social and Information Networks · Computer Science 2021-04-22 Min-Ren Chen , Ping Huang , Yu Lin , Shi-Min Cai

We propose the Graph Space Embedding (GSE), a technique that maps the input into a space where interactions are implicitly encoded, with little computations required. We provide theoretical results on an optimal regime for the GSE, namely a…

Machine Learning · Computer Science 2019-08-01 João Pereira , Albert Groen , Erik Stroes , Evgeni Levin
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