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Low Reynolds number swimmers frequently move near boundaries, such as spirochetes moving through porous tissues and sperm navigating the reproductive tract. Furthermore, these microorganisms must often navigate non-Newtonian fluids such as…

Fluid Dynamics · Physics 2023-11-10 D. Gagnon , B. Thomases , R. D. Guy , P. E. Arratia

The activity of growing living bacteria was investigated using real-time and in situ rheology -- in stationary and oscillatory shear. Two different strains of the human pathogen Staphylococcus aureus -- strain COL and its isogenic cell wall…

Biological Physics · Physics 2015-06-19 P. Patricio , P. L. Almeida , R. Portela , R. G. Sobral , I. R. Grilo , T. Cidade , C. R. Leal

The phase behavior of hydrocarbon fluids confined in porous media has been reported to deviate significantly from that in the bulk environment due to the existence of sub-10nm pores. Though experiments and simulations have measured the…

Soft Condensed Matter · Physics 2020-03-16 Jiaoyan Li , Qi Rao , Yidong Xia , Michael P. Hoepfner , Milind Deo

We study the rheological behaviour of a dense bidispersed suspension varying the relative size of the two dispersed phases. The main outcome of our analysis is that an enhanced flowability (reduced relative viscosity) of the suspension can…

Soft Condensed Matter · Physics 2023-02-21 Alessandro Monti , Marco Edoardo Rosti

We study the collective dynamics of elongated swimmers in a very thin fluid layer by devising long, filamentous, non-tumbling bacteria. The strong confinement induces weak nematic alignment upon collision, which, for large enough density of…

Statistical Mechanics · Physics 2017-02-22 Daiki Nishiguchi , Ken H. Nagai , Hugues Chaté , Masaki Sano

We experimentally study the emergence of collective bacterial swimming, a phenomenon often referred to as bacterial turbulence. A phase diagram of the flow of 3D E. coli suspensions spanned by bacterial concentration, the swimming speed of…

Soft Condensed Matter · Physics 2021-03-09 Yi Peng , Zhengyang Liu , Xiang Cheng

We studied the swimming of \textit{Escherichia coli} bacteria in the vicinity of the critical point in a solution of the non-ionic surfactant \chem{C_{12}E_{5}} in buffer solution. In phase contrast microscopy, each swimming cell produces a…

Soft Condensed Matter · Physics 2018-08-07 Nick Koumakis , Clémence Devailly , Wilson C. K. Poon

Bacteria suspension exhibits a wide range of collective phenomena arising from interactions between individual cells. Here we show Serratia marcescens cells near an air-liquid interface spontaneously aggregate into dynamic clusters through…

Soft Condensed Matter · Physics 2015-09-30 Xiao Chen , Xiang Yang , Mingcheng Yang , Hepeng Zhang

When dealing with unsaturated wet granular materials, a fundamental question is: what is the effect of capillary cohesion on the bulk flow and yield behavior? We inwestigate the dense flow rheology of unsaturated granular materials through…

Soft Condensed Matter · Physics 2018-08-29 M. Badetti , A. Fall , F. Chevoir , P. Aimedieu , S. Rodts , J. -N. Roux

Bacteria in biofilms form complex structures and can collectively migrate within mobile aggregates, which is referred to as swarming. This behavior is influenced by a combination of various factors, including morphological characteristics…

Soft Condensed Matter · Physics 2024-01-19 Bohan Wu-Zhang , Dmitry A. Fedosov , Gerhard Gompper

We numerically study the dynamics of run-and-tumble particles confined in two chambers connected by thin channels. Two dominant dynamical behaviors emerge: (i) an oscillatory pumping state, in which particles periodically fill the two…

Soft Condensed Matter · Physics 2015-11-04 M. Paoluzzi , R. Di Leonardo , L. Angelani

The dynamics and rheology of a vesicle confined in a channel under shear flow are studied at finite temperature. The effect of finite temperature on vesicle motion and system viscosity is investigated. A two-dimensional numerical model,…

Soft Condensed Matter · Physics 2022-10-04 A. Lamura

A flagellated bacterium navigates fluid environments by rotating its helical flagellar bundle. The wobbling of the bacterial body significantly influences its swimming behavior. To quantify the three underlying motions--precession,…

Soft Condensed Matter · Physics 2026-05-29 Jinglei Hu , Chen Gui , Mingxin Mao , Pu Feng , Yurui Liu , Xiangjun Gong , Gerhard Gompper

Results on the rheological behavior of novel CHO cell suspensions in a large range of concentrations are reported. The concentration dependent yield stress and elastic plateau modulus are formalized in the context of fractal aggregates…

Soft Condensed Matter · Physics 2009-11-13 Andreea Iordan , Alain Duperray , Claude Verdier

Bacterial biofilms cost an enormous amount of resources in the health, medical, and industrial sectors. To understand early biofilm formation, beginning from planktonic states of active bacterial suspensions (such as Escherichia coli) to…

Soft Condensed Matter · Physics 2021-12-07 Chamkor Singh

Janus phoretic particles exploit chemical energy stored in their environment to self-propel. These active particles modify and respond to their hydrodynamic and chemical environments, thus giving them a sensibility to external flows and…

Soft Condensed Matter · Physics 2024-05-15 Prathmesh Vinze , Sebastien Michelin

Using a simple model of self-propelled particle, the effective shear viscosity of a dilute, spatially homogeneous suspension of active particles is studied. We use formulation of non-linear Fokker-Planck equation to drive a kinetic…

Soft Condensed Matter · Physics 2017-02-16 M. Moradi

In the present work we simulate the basic two-dimensional dynamics of swarming E. coli bacteria on the surface of a moderately soft agar plate. Individual bacteria are modelled by self-propelled ridged bodies (agents), which interact with…

Soft Condensed Matter · Physics 2016-12-31 David Hansmann , Guido Fier , Rubén Carlos Buceta

Dense suspensions are non-Newtonian fluids which exhibit strong shear thickening and normal stress differences. Using numerical simulation of extensional and shear flows, we investigate how rheological properties are determined by the…

Soft Condensed Matter · Physics 2017-08-04 Ryohei Seto , Giulio G. Giusteri , Antonio Martiniello

We study the rheology of bidisperse non-Brownian suspensions using particle-based simulation, mapping the viscosity as a function of the size ratio of the species, their relative abundance, and the overall solid content. The variation of…

Soft Condensed Matter · Physics 2024-06-04 Abhinendra Singh , Christopher Ness , Abhishek K. Sharma , Juan J. de Pablo , Heinrich M. Jaeger