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Related papers: GSI: GPU-friendly Subgraph Isomorphism

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Optimization over trained machine learning models has applications including: verification, minimizing neural acquisition functions, and integrating a trained surrogate into a larger decision-making problem. This paper formulates and solves…

Optimization and Control · Mathematics 2023-10-13 Shiqiang Zhang , Juan S. Campos , Christian Feldmann , David Walz , Frederik Sandfort , Miriam Mathea , Calvin Tsay , Ruth Misener

Identifying cohesive subgraphs in hypergraphs is a fundamental problem that has received recent attention in data mining and engineering fields. Existing approaches mainly focus on a strongly induced subhypergraph or edge cardinality,…

Social and Information Networks · Computer Science 2023-09-19 Dahee Kim , Junghoon Kim , Sungsu Lim , Hyun Ji Jeong

Hyperspectral image (HSI) clustering is a challenging task due to its high complexity. Despite subspace clustering shows impressive performance for HSI, traditional methods tend to ignore the global-local interaction in HSI data. In this…

Computer Vision and Pattern Recognition · Computer Science 2024-04-09 Jingxin Wang , Renxiang Guan , Kainan Gao , Zihao Li , Hao Li , Xianju Li , Chang Tang

Graph neural networks (GNNs) have achieved great success in many scenarios with graph-structured data. However, in many real applications, there are three issues when applying GNNs: graphs are unknown, nodes have noisy features, and graphs…

Machine Learning · Computer Science 2022-10-11 Yixiang Shan , Jielong Yang , Xing Liu , Yixing Gao , Hechang Chen , Shuzhi Sam Ge

The modeling flexibility provided by hypergraphs has drawn a lot of interest from the combinatorial scientific community, leading to novel models and algorithms, their applications, and development of associated tools. Hypergraphs are now a…

Data Structures and Algorithms · Computer Science 2015-03-19 Enver Kayaaslan , Ali Pinar , Umit V. Catalyurek , Cevdet Aykanat

Subgraph Isomorphism is a very basic graph problem, where given two graphs $G$ and $H$ one is to check whether $G$ is a subgraph of $H$. Despite its simple definition, the Subgraph Isomorphism problem turns out to be very broad, as it…

Data Structures and Algorithms · Computer Science 2015-04-14 Marek Cygan , Jakub Pachocki , Arkadiusz Socała

Subgraph matching has garnered increasing attention for its diverse real-world applications. Given the dynamic nature of real-world graphs, addressing evolving scenarios without incurring prohibitive overheads has been a focus of research.…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-31 Linshan Qiu , Lu Chen , Hailiang Jie , Xiangyu Ke , Yunjun Gao , Yang Liu , Zetao Zhang

GPU-based HPC clusters are attracting more scientific application developers due to their extensive parallelism and energy efficiency. In order to achieve portability among a variety of multi/many core architectures, a popular choice for an…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-04-10 Ali TehraniJamsaz , Alok Mishra , Akash Dutta , Abid M. Malik , Barbara Chapman , Ali Jannesari

Graph neural networks have achieved state-of-the-art accuracy for graph node classification. However, GNNs are difficult to scale to large graphs, for example frequently encountering out-of-memory errors on even moderate size graphs. Recent…

Machine Learning · Computer Science 2022-10-26 Ziyuan Wang , Feiming Yang , Rui Fan

We consider the subgraph isomorphism problem where, given two graphs G (source graph) and F (pattern graph), one is to decide whether there is a (not necessarily induced) subgraph of G isomorphic to F. While many practical heuristic…

Data Structures and Algorithms · Computer Science 2019-08-30 Josef Malík , Ondřej Suchý , Tomáš Valla

In this work, we study the problem of partitioning a set of graphs into different groups such that the graphs in the same group are similar while the graphs in different groups are dissimilar. This problem was rarely studied previously,…

Machine Learning · Computer Science 2023-02-07 Jinyu Cai , Yi Han , Wenzhong Guo , Jicong Fan

Deep learning methods for graphs achieve remarkable performance on many node-level and graph-level prediction tasks. However, despite the proliferation of the methods and their success, prevailing Graph Neural Networks (GNNs) neglect…

Machine Learning · Computer Science 2020-11-10 Emily Alsentzer , Samuel G. Finlayson , Michelle M. Li , Marinka Zitnik

Graph Neural Networks (GNNs) excel in various graph learning tasks but face computational challenges when applied to large-scale graphs. A promising solution is to remove non-essential edges to reduce the computational overheads in GNN.…

Machine Learning · Computer Science 2024-02-05 Guibin Zhang , Yanwei Yue , Kun Wang , Junfeng Fang , Yongduo Sui , Kai Wang , Yuxuan Liang , Dawei Cheng , Shirui Pan , Tianlong Chen

The Subgraph Matching (SM) problem consists of finding all the embeddings of a given small graph, called the query, into a large graph, called the target. The SM problem has been widely studied for simple graphs, i.e. graphs where there is…

Many applications require to learn, mine, analyze and visualize large-scale graphs. These graphs are often too large to be addressed efficiently using conventional graph processing technologies. Many applications have requirements to…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-23 Santosh Pandey , Lingda Li , Adolfy Hoisie , Xiaoye S. Li , Hang Liu

Load-balancing among the threads of a GPU for graph analytics workloads is difficult because of the irregular nature of graph applications and the high variability in vertex degrees, particularly in power-law graphs. We describe a novel…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-02-28 Vishwesh Jatala , Loc Hoang , Roshan Dathathri , Gurbinder Gill , V Krishna Nandivada , Keshav Pingali

Implicit time integration is key to robustly simulating stiff materials and large deformations, but its performance is often dominated by repeatedly solving large linear systems. Adaptive coarsening can reduce this cost by concentrating…

Graphics · Computer Science 2026-05-07 Xuan Wang , Zhaofeng Luo , Minchen Li , Taku Komura , Kemeng Huang

Graph coarsening is a widely used dimensionality reduction technique for approaching large-scale graph machine learning problems. Given a large graph, graph coarsening aims to learn a smaller-tractable graph while preserving the properties…

Machine Learning · Statistics 2022-10-04 Manoj Kumar , Anurag Sharma , Sandeep Kumar

Large-scale observational health databases are increasingly popular for conducting comparative effectiveness and safety studies of medical products. However, increasing number of patients poses computational challenges when fitting survival…

Computation · Statistics 2023-10-26 Jianxiao Yang , Martijn J. Schuemie , Xiang Ji , Marc A. Suchard

Current trends in the computer graphics community propose leveraging the massive parallel computational power of GPUs to accelerate physically based simulations. Collision detection and solving is a fundamental part of this process. It is…

Graphics · Computer Science 2021-10-06 Hugo Bertiche , Meysam Madadi , Sergio Escalera