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Learning directed acyclic graphs (DAGs) is long known a critical challenge at the core of probabilistic and causal modeling. The NoTears approach of (Zheng et al., 2018), through a differentiable function involving the matrix exponential…

Machine Learning · Computer Science 2023-10-11 Shuyu Dong , Michèle Sebag

We propose to address the task of causal structure learning from data in a supervised manner. Existing work on learning causal directions by supervised learning is restricted to learning pairwise relation, and not well suited for whole DAG…

Machine Learning · Computer Science 2020-06-09 Hebi Li , Qi Xiao , Jin Tian

In this paper we consider the problem of learning the genetic-interaction-map, i.e., the topology of a directed acyclic graph (DAG) of genetic interactions from noisy double knockout (DK) data. Based on a set of well established biological…

Genomics · Quantitative Biology 2016-09-12 Fabio Nikolay , Marius Pesavento , George Kritikos , Nassos Typas

We consider the problem of estimating the differences between two causal directed acyclic graph (DAG) models with a shared topological order given i.i.d. samples from each model. This is of interest for example in genomics, where changes in…

Methodology · Statistics 2018-11-08 Yuhao Wang , Chandler Squires , Anastasiya Belyaeva , Caroline Uhler

A common theme in causal inference is learning causal relationships between observed variables, also known as causal discovery. This is usually a daunting task, given the large number of candidate causal graphs and the combinatorial nature…

Machine Learning · Statistics 2022-10-11 Romain Lopez , Jan-Christian Hütter , Jonathan K. Pritchard , Aviv Regev

Causal graphs, such as directed acyclic graphs (DAGs) and partial ancestral graphs (PAGs), represent causal relationships among variables in a model. Methods exist for learning DAGs and PAGs from data and for converting DAGs to PAGs.…

Machine Learning · Statistics 2018-01-19 Nishant Subramani

Simulations are ubiquitous in machine learning. Especially in graph learning, simulations of Directed Acyclic Graphs (DAG) are being deployed for evaluating new algorithms. In the literature, it was recently argued that…

Machine Learning · Computer Science 2022-06-16 Jonas Seng , Matej Zečević , Devendra Singh Dhami , Kristian Kersting

Using both observational and experimental data, a causal discovery process can identify the causal relationships between variables. A unique adaptive intervention design paradigm is presented in this work, where causal directed acyclic…

Machine Learning · Computer Science 2025-05-12 Abdelmonem Elrefaey , Rong Pan

A directed acyclic graph (DAG) is the most common graphical model for representing causal relationships among a set of variables. When restricted to using only observational data, the structure of the ground truth DAG is identifiable only…

Data Structures and Algorithms · Computer Science 2018-09-12 AmirEmad Ghassami , Saber Salehkaleybar , Negar Kiyavash , Kun Zhang

Recent work on causal abstraction, in particular graphical approaches focusing on causal structure between clusters of variables, aims to summarize a high-dimensional causal structure in terms of a low-dimensional one. Existing methods for…

Machine Learning · Statistics 2026-05-12 Francisco Madaleno , Francisco C Pereira , Alex Markham

Causal inference aids researchers in discovering cause-and-effect relationships, leading to scientific insights. Accurate causal estimation requires identifying confounding variables to avoid false discoveries. Pearl's causal model uses…

Machine Learning · Computer Science 2025-04-22 Anna Zeng , Michael Cafarella , Batya Kenig , Markos Markakis , Brit Youngmann , Babak Salimi

Synthetic data can be used in various applications, such as correcting bias datasets or replacing scarce original data for simulation purposes. Generative Adversarial Networks (GANs) are considered state-of-the-art for developing generative…

Machine Learning · Computer Science 2022-03-08 Gael Lederrey , Tim Hillel , Michel Bierlaire

Discovering the underlying Directed Acyclic Graph (DAG) from time series observational data is highly challenging due to the dynamic nature and complex nonlinear interactions between variables. Existing methods typically search for the…

Machine Learning · Computer Science 2025-03-21 Jiajun Zhang , Boyang Qiang , Xiaoyu Guo , Weiwei Xing , Yue Cheng , Witold Pedrycz

When designing new molecules with particular properties, it is not only important what to make but crucially how to make it. These instructions form a synthesis directed acyclic graph (DAG), describing how a large vocabulary of simple…

Machine Learning · Computer Science 2020-12-22 John Bradshaw , Brooks Paige , Matt J. Kusner , Marwin H. S. Segler , José Miguel Hernández-Lobato

In this paper, we study classes of graphs with three types of edges that capture the modified independence structure of a directed acyclic graph (DAG) after marginalisation over unobserved variables and conditioning on selection variables…

Other Statistics · Statistics 2013-12-18 Kayvan Sadeghi

While visual comparison of directed acyclic graphs (DAGs) is commonly encountered in various disciplines (e.g., finance, biology), knowledge about humans' perception of graph similarity is currently quite limited. By graph similarity…

Human-Computer Interaction · Computer Science 2017-09-07 Kathrin Ballweg , Margit Pohl , Günter Wallner , Tatiana von Landesberger

Learning causal relationships between variables is a well-studied problem in statistics, with many important applications in science. However, modeling real-world systems remain challenging, as most existing algorithms assume that the…

Score-based approaches in the structure learning task are thriving because of their scalability. Continuous relaxation has been the key reason for this advancement. Despite achieving promising outcomes, most of these methods are still…

Machine Learning · Computer Science 2023-09-07 Quang-Duy Tran , Phuoc Nguyen , Bao Duong , Thin Nguyen

Bayesian networks are a class of popular graphical models that encode causal and conditional independence relations among variables by directed acyclic graphs (DAGs). We propose a novel structure learning method, annealing on regularized…

Machine Learning · Statistics 2020-05-04 Qiaoling Ye , Arash A. Amini , Qing Zhou

Discovering the causal relationship via recovering the directed acyclic graph (DAG) structure from the observed data is a well-known challenging combinatorial problem. When there are latent variables, the problem becomes even more…

Machine Learning · Statistics 2023-11-02 Yunfeng Cai , Xu Li , Minging Sun , Ping Li