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This paper presents new parallel algorithms for generating Euclidean minimum spanning trees and spatial clustering hierarchies (known as HDBSCAN$^*$). Our approach is based on generating a well-separated pair decomposition followed by using…

Data Structures and Algorithms · Computer Science 2021-04-05 Yiqiu Wang , Shangdi Yu , Yan Gu , Julian Shun

Classic cache-oblivious parallel matrix multiplication algorithms achieve optimality either in time or space, but not both, which promotes lots of research on the best possible balance or tradeoff of such algorithms. We study modern…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-11-14 Yuan Tang

High Speed computing meets ever increasing real-time computational demands through the leveraging of flexibility and parallelism. The flexibility is achieved when computing platform designed with heterogeneous resources to support…

Operating Systems · Computer Science 2015-01-08 Mahendra Vucha , Arvind Rajawat

Empirical studies are fundamental in assessing the effectiveness of implementations of branch-and-bound algorithms. The complexity of such implementations makes empirical study difficult for a wide variety of reasons. Various attempts have…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-21 Stephen J. Maher , Ted K. Ralphs , Yuji Shinano

Matrix factorization (MF) discovers latent features from observations, which has shown great promises in the fields of collaborative filtering, data compression, feature extraction, word embedding, etc. While many problem-specific…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-08-14 Wei Tan , Shiyu Chang , Liana Fong , Cheng Li , Zijun Wang , Liangliang Cao

Efficient multi-core parallel processing of recursive join queries is critical for achieving good performance in graph database management systems (GDBMSs). Prior work adopts two broad approaches. First is the state of the art morsel-driven…

Databases · Computer Science 2025-08-28 Anurag Chakraborty , Semih Salihoğlu

Shared resource interference is observed by applications as dynamic performance asymmetry. Prior art has developed approaches to reduce the impact of performance asymmetry mainly at the operating system and architectural levels. In this…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-09-24 Jing Chen , Pirah Noor Soomro , Mustafa Abduljabbar , Madhavan Manivannan , Miquel Pericas

Mapping applications onto heterogeneous platforms is a difficult challenge, even for simple application patterns such as pipeline graphs. The problem is even more complex when processors are subject to failure during the execution of the…

Distributed, Parallel, and Cluster Computing · Computer Science 2008-03-26 Anne Benoit , Veronika Rehn-Sonigo , Yves Robert

Many complex real-world tasks are composed of several levels of sub-tasks. Humans leverage these hierarchical structures to accelerate the learning process and achieve better generalization. In this work, we study the inductive bias and…

Machine Learning · Computer Science 2021-03-23 Yuchen Lu , Yikang Shen , Siyuan Zhou , Aaron Courville , Joshua B. Tenenbaum , Chuang Gan

We propose efficient parallel algorithms and implementations on shared memory architectures of LU factorization over a finite field. Compared to the corresponding numerical routines, we have identified three main difficulties specific to…

Symbolic Computation · Computer Science 2014-02-17 Jean-Guillaume Dumas , Thierry Gautier , Clément Pernet , Ziad Sultan

We introduce a data distribution scheme for $\mathcal{H}$-matrices and a distributed-memory algorithm for $\mathcal{H}$-matrix-vector multiplication. Our data distribution scheme avoids an expensive $\Omega(P^2)$ scheduling procedure used…

Numerical Analysis · Mathematics 2020-09-23 Yingzhou Li , Jack Poulson , Lexing Ying

Computationally-intensive loops are the primary source of parallelism in scientific applications. Such loops are often irregular and a balanced execution of their loop iterations is critical for achieving high performance. However, several…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-25 Ahmed Eleliemy , Florina M. Ciorba

Large classes of materials systems in physics and engineering are governed by magnetic and electrostatic interactions. Continuum or mesoscale descriptions of such systems can be cast in terms of integral equations, whose direct…

Computational Physics · Physics 2016-08-15 Xikai Jiang , Jiyuan Li , Xujun Zhao , Jian Qin , Dmitry Karpeev , Juan Hernandez-Ortiz , Juan de Pablo , Olle Heinonen

The definition of a Neural Network architecture is one of the most critical and challenging tasks to perform. In this paper, we propose ParallelMLPs. ParallelMLPs is a procedure to enable the training of several independent Multilayer…

Machine Learning · Computer Science 2022-06-20 Felipe Costa Farias , Teresa Bernarda Ludermir , Carmelo Jose Albanez Bastos-Filho

We present a simple mathematical framework and API for parallel mesh and data distribution, load balancing, and overlap generation. It relies on viewing the mesh as a Hasse diagram, abstracting away information such as cell shape,…

Mathematical Software · Computer Science 2015-06-23 Matthew G. Knepley , Michael Lange , Gerard J. Gorman

Parallelization is a popular strategy for improving the performance of iterative algorithms. Optimization methods are no exception: design of efficient parallel optimization methods and tight analysis of their theoretical properties are…

Optimization and Control · Mathematics 2023-11-28 Alexander Tyurin , Peter Richtárik

Control parallelism and data parallelism is mostly reasoned and optimized as separate functions. Because of this, workloads that are irregular, fine-grain and dynamic such as dynamic graph processing become very hard to scale. An…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-03-08 Bibrak Qamar Chandio , Thomas Sterling , Prateek Srivastava

Manual parallelization of code remains a significant challenge due to the complexities of modern software systems and the widespread adoption of multi-core architectures. This paper introduces OMPar, an AI-driven tool designed to automate…

Computation and Language · Computer Science 2024-09-24 Tal Kadosh , Niranjan Hasabnis , Prema Soundararajan , Vy A. Vo , Mihai Capota , Nesreen Ahmed , Yuval Pinter , Gal Oren

The aim of the paper is to introduce general techniques in order to optimize the parallel execution time of sorting on a distributed architectures with processors of various speeds. Such an application requires a partitioning step. For…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-08-16 Christophe Cérin , Jean-Christophe Dubacq , Jean-Louis Roch , the SafeScale Collaboration

We present a new approach to fault tolerance for High Performance Computing system. Our approach is based on a careful adaptation of the Algorithmic Based Fault Tolerance technique (Huang and Abraham, 1984) to the need of parallel…

Distributed, Parallel, and Cluster Computing · Computer Science 2008-06-20 George Bosilca , Remi Delmas , Jack Dongarra , Julien Langou
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