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Knowledge graphs are powerful tools for representing and organising complex biomedical data. Several knowledge graph embedding algorithms have been proposed to learn from and complete knowledge graphs. However, a recent study demonstrates…

Biomedical Knowledge Graphs (BKGs) integrate diverse datasets to elucidate complex relationships within the biomedical field. Effective link prediction on these graphs can uncover valuable connections, such as potential novel drug-disease…

Computation and Language · Computer Science 2025-07-01 Tien Dang , Viet Thanh Duy Nguyen , Minh Tuan Le , Truong-Son Hy

We demonstrated the existence of a group algebraic structure hidden in relational knowledge embedding problems, which suggests that a group-based embedding framework is essential for designing embedding models. Our theoretical analysis…

Artificial Intelligence · Computer Science 2020-09-04 Tong Yang , Long Sha , Pengyu Hong

Knowledge embeddings (KE) represent a knowledge graph (KG) by embedding entities and relations into continuous vector spaces. Existing methods are mainly structure-based or description-based. Structure-based methods learn representations…

Computation and Language · Computer Science 2023-06-30 Xintao Wang , Qianyu He , Jiaqing Liang , Yanghua Xiao

Knowledge Graph Embedding (KGE) models are used to learn continuous representations of entities and relations. A key task in the literature is predicting missing links between entities. However, Knowledge Graphs are not just sets of links…

Artificial Intelligence · Computer Science 2023-08-28 Thiviyan Thanapalasingam , Emile van Krieken , Peter Bloem , Paul Groth

Human knowledge provides a formal understanding of the world. Knowledge graphs that represent structural relations between entities have become an increasingly popular research direction towards cognition and human-level intelligence. In…

Computation and Language · Computer Science 2021-04-02 Shaoxiong Ji , Shirui Pan , Erik Cambria , Pekka Marttinen , Philip S. Yu

We study the knowledge extrapolation problem to embed new components (i.e., entities and relations) that come with emerging knowledge graphs (KGs) in the federated setting. In this problem, a model trained on an existing KG needs to embed…

Computation and Language · Computer Science 2022-05-11 Mingyang Chen , Wen Zhang , Zhen Yao , Xiangnan Chen , Mengxiao Ding , Fei Huang , Huajun Chen

Knowledge graph completion aims to predict the new links in given entities among the knowledge graph (KG). Most mainstream embedding methods focus on fact triplets contained in the given KG, however, ignoring the rich background information…

Artificial Intelligence · Computer Science 2020-10-13 Zhaochong An , Bozhou Chen , Houde Quan , Qihui Lin , Hongzhi Wang

Knowledge graph representation learning approaches provide a mapping between symbolic knowledge in the form of triples in a knowledge graph (KG) and their feature vectors. Knowledge graph embedding (KGE) models often represent relations in…

Machine Learning · Computer Science 2025-07-18 Kossi Amouzouvi , Bowen Song , Andrea Coletta , Luigi Bellomarini , Jens Lehmann , Sahar Vahdati

Knowledge graph embeddings (KGEs) were originally developed to infer true but missing facts in incomplete knowledge repositories. In this paper, we link knowledge graph completion and counterfactual reasoning via our new task CFKGR. We…

Machine Learning · Computer Science 2024-03-12 Lena Zellinger , Andreas Stephan , Benjamin Roth

Knowledge Graphs (KGs) are ubiquitous structures for information storagein several real-world applications such as web search, e-commerce, social networks, and biology. Querying KGs remains a foundational and challenging problem due to…

Machine Learning · Computer Science 2021-05-14 Nurendra Choudhary , Nikhil Rao , Sumeet Katariya , Karthik Subbian , Chandan K. Reddy

Knowledge graphs represent information as structured triples and serve as the backbone for a wide range of applications, including question answering, link prediction, and recommendation systems. A prominent line of research for exploring…

Machine Learning · Computer Science 2025-10-15 Rita T. Sousa , Heiko Paulheim

Knowledge graph embedding has recently become a popular way to model relations and infer missing links. In this paper, we present a group theoretical perspective of knowledge graph embedding, connecting previous methods with different group…

Machine Learning · Computer Science 2019-12-02 Chen Cai

Knowledge graph embedding, which projects symbolic entities and relations into continuous vector spaces, is gaining increasing attention. Previous methods allow a single static embedding for each entity or relation, ignoring their intrinsic…

Artificial Intelligence · Computer Science 2020-04-07 Quan Wang , Pingping Huang , Haifeng Wang , Songtai Dai , Wenbin Jiang , Jing Liu , Yajuan Lyu , Yong Zhu , Hua Wu

Large-scale knowledge bases have currently reached impressive sizes; however, these knowledge bases are still far from complete. In addition, most of the existing methods for knowledge base completion only consider the direct links between…

Computation and Language · Computer Science 2017-02-27 Xixun Lin , Yanchun Liang , Fausto Giunchiglia , Xiaoyue Feng , Renchu Guan

Knowledge graph embedding aims at offering a numerical knowledge representation paradigm by transforming the entities and relations into continuous vector space. However, existing methods could not characterize the knowledge graph in a fine…

Artificial Intelligence · Computer Science 2017-06-20 Han Xiao , Minlie Huang , Xiaoyan Zhu

Knowledge graph embedding (KGE) models encode the structural information of knowledge graphs to predicting new links. Effective training of these models requires distinguishing between positive and negative samples with high precision.…

Machine Learning · Computer Science 2025-04-07 Makoto Takamoto , Daniel Oñoro-Rubio , Wiem Ben Rim , Takashi Maruyama , Bhushan Kotnis

Embedding methods transform the knowledge graph into a continuous, low-dimensional space, facilitating inference and completion tasks. Existing methods are mainly divided into two types: translational distance models and semantic matching…

Information Retrieval · Computer Science 2025-03-11 Deepak Banerjee , Anjali Ishaan

Knowledge graphs (KGs) consisting of triples are always incomplete, so it's important to do Knowledge Graph Completion (KGC) by predicting missing triples. Multi-Source KG is a common situation in real KG applications which can be viewed as…

Computation and Language · Computer Science 2020-10-27 Mingyang Chen , Wen Zhang , Zonggang Yuan , Yantao Jia , Huajun Chen

Predicting missing facts in a knowledge graph (KG) is a crucial task in knowledge base construction and reasoning, and it has been the subject of much research in recent works using KG embeddings. While existing KG embedding approaches…

Computation and Language · Computer Science 2020-10-09 Xuelu Chen , Muhao Chen , Changjun Fan , Ankith Uppunda , Yizhou Sun , Carlo Zaniolo