English
Related papers

Related papers: Self-Referencing Embedded Strings (SELFIES): A 100…

200 papers

Self-supervised learning holds promise to revolutionize molecule property prediction - a central task to drug discovery and many more industries - by enabling data efficient learning from scarce experimental data. Despite significant…

Generative molecular design has moved from proof-of-concept to real-world applicability, as marked by the surge in very recent papers reporting experimental validation. Key challenges in explainability and sample efficiency present…

Biomolecules · Quantitative Biology 2024-03-05 Jeff Guo , Philippe Schwaller

We propose a novel molecular fingerprint-based variational autoencoder applied for molecular generation on real-world drug molecules. We define more suitable and pharma-relevant baseline metrics and tests, focusing on the generation of…

Machine Learning · Computer Science 2022-11-17 Ruslan N. Tazhigulov , Joshua Schiller , Jacob Oppenheim , Max Winston

Biological intelligence is remarkable in its ability to produce complex behaviour in many diverse situations through data efficient, generalisable and transferable skill acquisition. It is believed that learning "good" sensory…

Neurons and Cognition · Quantitative Biology 2022-03-18 Irina Higgins , Sébastien Racanière , Danilo Rezende

Deep learning natural language processing models often use vector word embeddings, such as word2vec or GloVe, to represent words. A discrete sequence of words can be much more easily integrated with downstream neural layers if it is…

Machine Learning · Computer Science 2020-03-04 Aliakbar Panahi , Seyran Saeedi , Tom Arodz

The recent emergence of Self-Supervised Learning (SSL) as a fundamental paradigm for learning image representations has, and continues to, demonstrate high empirical success in a variety of tasks. However, most SSL approaches fail to learn…

Computer Vision and Pattern Recognition · Computer Science 2024-11-06 Alžběta Manová , Aiden Durrant , Georgios Leontidis

Satisfiability solvers are increasingly playing a key role in software verification, with particularly effective use in the analysis of security vulnerabilities. String processing is a key part of many software applications, such as…

Computational Complexity · Computer Science 2009-03-17 Susmit Jha , Sanjit A. Seshia , Rhishikesh Limaye

In supervised approaches for keyphrase extraction, a candidate phrase is encoded with a set of hand-crafted features and machine learning algorithms are trained to discriminate keyphrases from non-keyphrases. Although the manually-designed…

Computation and Language · Computer Science 2018-01-08 Corina Florescu , Wei Jin

Molecular generation plays an important role in drug discovery and materials science, especially in data-scarce scenarios where traditional generative models often struggle to achieve satisfactory conditional generalization. To address this…

Machine Learning · Computer Science 2025-05-13 Zimo Yan , Jie Zhang , Zheng Xie , Chang Liu , Yizhen Liu , Yiping Song

This paper proposes to address the word sense ambiguity issue in an unsupervised manner, where word sense representations are learned along a word sense selection mechanism given contexts. Prior work focused on designing a single model to…

Computation and Language · Computer Science 2018-07-03 Guang-He Lee , Yun-Nung Chen

Music Information Retrieval (MIR) research is increasingly leveraging representation learning to obtain more compact, powerful music audio representations for various downstream MIR tasks. However, current representation evaluation methods…

Sound · Computer Science 2023-12-13 Christos Plachouras , Pablo Alonso-Jiménez , Dmitry Bogdanov

In materials science, the challenge of rapid prototyping materials with desired properties often involves extensive experimentation to find suitable microstructures. Additionally, finding microstructures for given properties is typically an…

Machine Learning · Computer Science 2024-05-22 Sébastien Bompas , Stefan Sandfeld

Recent studies have introduced methods for learning acoustic word embeddings (AWEs)---fixed-size vector representations of words which encode their acoustic features. Despite the widespread use of AWEs in speech processing research, they…

Computation and Language · Computer Science 2020-04-06 Yevgen Matusevych , Herman Kamper , Sharon Goldwater

Molecule-and-text cross-modal representation learning has emerged as a promising direction for enhancing the quality of molecular representation, thereby improving performance in various scientific fields. However, most approaches employ a…

Quantitative Methods · Quantitative Biology 2025-03-04 Yikun Zhang , Geyan Ye , Chaohao Yuan , Bo Han , Long-Kai Huang , Jianhua Yao , Wei Liu , Yu Rong

Referring expression segmentation (RES), a task that involves localizing specific instance-level objects based on free-form linguistic descriptions, has emerged as a crucial frontier in human-AI interaction. It demands an intricate…

Computer Vision and Pattern Recognition · Computer Science 2024-02-13 Ying Zang , Chenglong Fu , Runlong Cao , Didi Zhu , Min Zhang , Wenjun Hu , Lanyun Zhu , Tianrun Chen

Data augmentations (DA) are the cores to achieving robust sequence-to-sequence learning on various natural language processing (NLP) tasks. However, most of the DA approaches force the decoder to make predictions conditioned on the…

Computation and Language · Computer Science 2022-04-26 Zheng Zhang , Liang Ding , Dazhao Cheng , Xuebo Liu , Min Zhang , Dacheng Tao

Molecule and text representation learning has gained increasing interest due to its potential for enhancing the understanding of chemical information. However, existing models often struggle to capture subtle differences between molecules…

Machine Learning · Computer Science 2025-10-31 Hyuntae Park , Yeachan Kim , SangKeun Lee

Inferring the structural properties of a protein from its amino acid sequence is a challenging yet important problem in biology. Structures are not known for the vast majority of protein sequences, but structure is critical for…

Machine Learning · Computer Science 2019-10-17 Tristan Bepler , Bonnie Berger

Chemical synthesis remains a critical bottleneck in the discovery and manufacture of functional small molecules. AI-based synthesis planning models could be a potential remedy to find effective syntheses, and have made progress in recent…

The rapid evolution of technology has transformed business operations and customer interactions worldwide, with personalization emerging as a key opportunity for e-commerce companies to engage customers more effectively. The application of…

Machine Learning · Computer Science 2024-08-27 Miguel Alves Gomes , Philipp Meisen , Tobias Meisen