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The most efficient way to pack equally sized spheres isotropically in 3D is known as the random close packed state, which provides a starting point for many approximations in physics and engineering. However, the particle size distribution…

Soft Condensed Matter · Physics 2010-01-05 Robert S. Farr , Robert D. Groot

We introduce a latent 3D representation that models 3D surfaces as probability density functions in 3D, i.e., p(x,y,z), with flow-matching. Our representation is specifically designed for consumption by machine learning models, offering…

Computer Vision and Pattern Recognition · Computer Science 2025-03-26 Jen-Hao Rick Chang , Yuyang Wang , Miguel Angel Bautista Martin , Jiatao Gu , Xiaoming Zhao , Josh Susskind , Oncel Tuzel

We advocate an optimization procedure for variable density sampling in the context of compressed sensing. In this perspective, we introduce a minimization problem for the coherence between the sparsity and sensing bases, whose solution…

Information Theory · Computer Science 2011-09-29 Gilles Puy , Pierre Vandergheynst , Yves Wiaux

The growth by condensation of small water droplets in a three-dimensional homogeneous isotropic turbulent flow is considered. Within a simple model of advection and condensation, the dynamics and growth of millions of droplets are…

Chaotic Dynamics · Physics 2008-07-15 Alessandra S. Lanotte , Agnese Seminara , Federico Toschi

We adapt and study a variance reduction approach for the homogenization of elliptic equations in divergence form. The approach, borrowed from atomistic simulations and solid-state science [von Pezold et al, Physical Review B 2010; Wei et…

Numerical Analysis · Mathematics 2015-09-07 Claude Le Bris , Frederic Legoll , William Minvielle

The simulation of fluid flow problems, specifically incompressible flows governed by the Navier-Stokes equations (NSE), holds fundamental significance in a range of scientific and engineering applications. Traditional numerical methods…

Computational Physics · Physics 2024-09-10 Abdullah Abukhwejah , Pankaj Jagad , Ravi Samtaney , Peter Schmid

High-fidelity modeling of turbulent flows is one of the major challenges in computational physics, with diverse applications in engineering, earth sciences and astrophysics, among many others. The rising popularity of high-fidelity…

Fluid Dynamics · Physics 2019-03-06 Arvind Mohan , Don Daniel , Michael Chertkov , Daniel Livescu

This work aims to describe a mathematical model and a numerical method to simulate a thin anisotropic composite membrane moving and deforming in 3D space under a dynamic load of an arbitrary time and space profile. The model and the method…

Numerical Analysis · Mathematics 2020-07-24 Vitalii Aksenov , Alexey Vasyukov , Igor Petrov

Micro- and mesostructures of multiphase materials obtained from tomography and image acquisition are an ever more important database for simulation analyses. Huge data sets for reconstructed 3d volumes typically as voxel grids call for…

Computational Engineering, Finance, and Science · Computer Science 2021-03-17 Ajinkya Gote , Andreas Fischer , Chuanzeng Zhang , Bernhard Eidel

Despite the constant evolution of similarity searching research, it continues to face the same challenges stemming from the complexity of the data, such as the curse of dimensionality and computationally expensive distance functions.…

Information Retrieval · Computer Science 2022-10-06 Jaroslav Oľha , Terézia Slanináková , Martin Gendiar , Matej Antol , Vlastislav Dohnal

Molecular dynamics simulations are indispensable for exploring the behavior of atoms and molecules. Grounded in quantum mechanical principles, quantum molecular dynamics provides high predictive power but its computational cost is dominated…

Chemical Physics · Physics 2025-09-10 Siu Wun Cheung , Youngsoo Choi , Jean-Luc Fattebert , Daniel Osei-Kuffuor

We present an implementation in a linear-scaling density-functional theory code of an electronic enthalpy method, which has been found to be natural and efficient for the ab initio calculation of finite systems under hydrostatic pressure.…

Mesoscale and Nanoscale Physics · Physics 2015-06-16 Niccolò R. C. Corsini , Andrea Greco , Nicholas D. M. Hine , Carla Molteni , Peter D. Haynes

Determining the spectral density of a molecular system immersed in a proteomic scaffold and in contact to a solvent is a fundamental challenge in the coarse-grained description of, e.g., electron and energy transfer dynamics. Once the…

Quantum Physics · Physics 2014-11-04 Leonardo A. Pachon , Paul Brumer

Conventional three-dimensional (3D) imaging methods require multiple measurements of the sample in different orientation or scanning. When the sample is probed with coherent waves, a single two-dimensional (2D) intensity measurement is…

Image and Video Processing · Electrical Eng. & Systems 2022-01-25 Tatiana Latychevskaia

Absorption spectra of liquid water at 300 K are calculated from both classical and density functional theory molecular dynamics simulation data, which together span from 1 MHz to hundreds of THz, agreeing well with experimental data…

Chemical Physics · Physics 2020-09-09 Shane Carlson , Florian N. Brünig , Philip Loche , Douwe Jan Bonthuis , Roland R. Netz

Using a simple model of photodissociated atomic hydrogen on a galactic scale, it is possible to derive total hydrogen volume densities. These densities, obtained through a combination of atomic hydrogen, far-ultraviolet and metallicity…

Astrophysics of Galaxies · Physics 2015-06-11 J. S. Heiner , J. R. Sánchez-Gallego , L. Rousseau-Nepton , J. H. Knapen

Diffusion models have demonstrated exceptional performances in various fields of generative modeling, but suffer from slow sampling speed due to their iterative nature. While this issue is being addressed in continuous domains, discrete…

Machine Learning · Computer Science 2025-05-12 Satoshi Hayakawa , Yuhta Takida , Masaaki Imaizumi , Hiromi Wakaki , Yuki Mitsufuji

Reconstructing high-resolution flow fields from sparse measurements is a major challenge in fluid dynamics. Existing methods often vectorize the flow by stacking different spatial directions on top of each other, hence confounding the…

Fluid Dynamics · Physics 2023-05-17 Mohammad Farazmand , Arvind K. Saibaba

We present numerical reconstructions of anisotropic conductivity tensors in three dimensions, from knowledge of a finite family of power density functionals. Such a problem arises in the coupled-physics imaging modality Ultrasound Modulated…

Numerical Analysis · Mathematics 2018-06-13 François Monard , Donsub Rim

The fundamental equations that model turbulent flow do not provide much insight into the size and shape of observed turbulent structures. We investigate the efficient and accurate representation of structures in two-dimensional turbulence…

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