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The Straightness is a measure designed to characterize a pair of vertices in a spatial graph. It is defined as the ratio of the Euclidean distance to the graph distance between these vertices. It is often used as an average, for instance to…

Discrete Mathematics · Computer Science 2023-05-12 Vincent Labatut

We study the directed maximum common edge subgraph problem (DMCES) for the class of directed graphs that are finite, weakly connected, oriented, and simple. We use DMCES to define a metric on partially ordered sets that can be represented…

Data Structures and Algorithms · Computer Science 2020-12-07 Robert Nerem , Peter Crawford-Kahrl , Bree Cummins , Tomas Gedeon

We consider the decentralized optimization problem, where a network of $n$ agents aims to collaboratively minimize the average of their individual smooth and convex objective functions through peer-to-peer communication in a directed graph.…

Optimization and Control · Mathematics 2023-12-07 Zhuoqing Song , Lei Shi , Shi Pu , Ming Yan

We analyze the correlation between randomly chosen edge weights on neighboring edges in a directed graph. This shared-endpoint correlation controls the expected organization of randomly drawn edge flows when the flow on each edge is…

Statistics Theory · Mathematics 2024-11-13 Joshua Richland , Alexander Strang

We introduce a new class of auto-encoders for directed graphs, motivated by a direct extension of the Weisfeiler-Leman algorithm to pairs of node labels. The proposed model learns pairs of interpretable latent representations for the nodes…

Machine Learning · Computer Science 2022-02-28 Georgios Kollias , Vasileios Kalantzis , Tsuyoshi Idé , Aurélie Lozano , Naoki Abe

Causal relationships among a set of variables are commonly represented by a directed acyclic graph. The orientations of some edges in the causal DAG can be discovered from observational/interventional data. Further edges can be oriented by…

Machine Learning · Computer Science 2022-05-30 Ramin Safaeian , Saber Salehkaleybar , Mahmoud Tabandeh

Graph-based learning is a rapidly growing sub-field of machine learning with applications in social networks, citation networks, and bioinformatics. One of the most popular models is graph attention networks. They were introduced to allow a…

Machine Learning · Computer Science 2023-05-23 Kimon Fountoulakis , Amit Levi , Shenghao Yang , Aseem Baranwal , Aukosh Jagannath

We consider the strongly connected components (SCCs) of a uniform directed graph on $n$ vertices with i.i.d. in- and out-degree pairs distributed as $(D^-,D^+)$, with $\mathbb E[D^+]=\mathbb E[D^-]=\mu$. We condition on equal total in- and…

Probability · Mathematics 2021-11-03 Serte Donderwinkel , Zheneng Xie

When network and graph theory are used in the study of complex systems, a typically finite set of nodes of the network under consideration is frequently either explicitly or implicitly considered representative of a much larger finite or…

Data Analysis, Statistics and Probability · Physics 2015-03-18 Jobst Heitzig , Jonathan F. Donges , Yong Zou , Norbert Marwan , Jürgen Kurths

While studies of meso-scale structures in networks often focus on community structure, core--periphery structures can reveal new insights. This structure typically consists of a well-connected core and a periphery that is well connected to…

Social and Information Networks · Computer Science 2021-03-17 Andrew Elliott , Angus Chiu , Marya Bazzi , Gesine Reinert , Mihai Cucuringu

Mainly motivated by the problem of modelling directional dependence relationships for multivariate count data in high-dimensional settings, we present a new algorithm, called learnDAG, for learning the structure of directed acyclic graphs…

Methodology · Statistics 2024-06-10 Thi Kim Hue Nguyen , Monica Chiogna , Davide Risso

Homophily is a graph property describing the tendency of edges to connect similar nodes. There are several measures used for assessing homophily but all are known to have certain drawbacks: in particular, they cannot be reliably used for…

Machine Learning · Computer Science 2024-12-16 Mikhail Mironov , Liudmila Prokhorenkova

The number of triangles in a graph is useful to deduce a plethora of important features of the network that the graph is modeling. However, finding the exact value of this number is computationally expensive. Hence, a number of…

Data Structures and Algorithms · Computer Science 2017-10-30 Duru Türkoğlu , Ata Turk

We propose a novel approach for learning node representations in directed graphs, which maintains separate views or embedding spaces for the two distinct node roles induced by the directionality of the edges. We argue that the previous…

Social and Information Networks · Computer Science 2019-07-01 Megha Khosla , Jurek Leonhardt , Wolfgang Nejdl , Avishek Anand

Motion planning is a fundamental problem of robotics with applications in many areas of computer science and beyond. Its restriction to graphs has been investigated in the literature for it allows to concentrate on the combinatorial problem…

Discrete Mathematics · Computer Science 2009-04-14 Zhilin Wu , Stephane Grumbach

Objective: Modelling the associations from high-throughput experimental molecular data has provided unprecedented insights into biological pathways and signalling mechanisms. Graphical models and networks have especially proven to be useful…

Machine Learning · Statistics 2013-04-24 Marco Scutari , Radhakrishnan Nagarajan

Directionality is a fundamental feature of network connections. Most structural brain networks are intrinsically directed because of the nature of chemical synapses, which comprise most neuronal connections. Due to limitations of…

Neurons and Cognition · Quantitative Biology 2018-01-19 Penelope Kale , Andrew Zalesky , Leonardo L. Gollo

Complex networks can model the structure and dynamics of different types of systems. It has been shown that they are characterized by a set of measures. In this work, we evaluate the variability of complex networks measures face to…

Physics and Society · Physics 2015-06-22 Raquel Cabral , Alejandro Frery , Jaime Ramírez

We consider the problem of learning causal directed acyclic graphs from an observational joint distribution. One can use these graphs to predict the outcome of interventional experiments, from which data are often not available. We show…

Machine Learning · Statistics 2016-08-18 Jonas Peters , Joris Mooij , Dominik Janzing , Bernhard Schölkopf

We introduce the notion of balance for directed graphs: a weighted directed graph is $\alpha$-balanced if for every cut $S \subseteq V$, the total weight of edges going from $S$ to $V\setminus S$ is within factor $\alpha$ of the total…

Data Structures and Algorithms · Computer Science 2016-03-31 Alina Ene , Gary Miller , Jakub Pachocki , Aaron Sidford
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