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Applications in cyber-physical systems are increasingly coupled with online instruments to perform long running, continuous data processing. Such "always on" dataflow applications are dynamic, where they need to change the applications…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-06-24 Yogesh Simmhan , Alok Kumbhare

High Energy Physics (HEP) and other scientific communities have adopted Service Oriented Architectures (SOA) as part of a larger Grid computing effort. This effort involves the integration of many legacy applications and programming…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Michael Thomas , Conrad Steenberg , Frank van Lingen , Harvey Newman , Julian Bunn , Arshad Ali , Richard McClatchey , Ashiq Anjum , Tahir Azim , Waqas ur Rehman , Faisal Khan , Jang Uk In

To effectively simulate the combustion of hydrocarbon-fueled supersonic engines, such as rocket-based combined cycle (RBCC) engines, a detailed mechanism for chemistry is usually required but computationally prohibitive. In order to…

Fluid Dynamics · Physics 2020-03-03 Jian An , Guo Qiang He , Kai Hong Luo , Fei Qin , Bing Liu

Materials exhibiting a substitutional disorder such as multicomponent alloys and mixed metal oxides/oxyfluorides are of great importance in many scientific and technological sectors. Disordered materials constitute an overwhelmingly large…

Recent developments in enhanced sampling methods showed that it is possible to reconstruct ligand unbinding pathways with spatial and temporal resolution inaccessible to experiments. Ideally, such techniques should provide an atomistic…

Biological Physics · Physics 2019-12-17 Jakub Rydzewski

Scalable and efficient numerical simulations continue to gain importance, as computation is firmly established as the third pillar of discovery, alongside theory and experiment. Meanwhile, the performance of computing hardware grows through…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-26 Pietro Incardona , Antonio Leo , Yaroslav Zaluzhnyi , Rajesh Ramaswamy , Ivo F. Sbalzarini

Known attempts to build autonomous robots rely on complex control architectures, often implemented with the Robot Operating System platform (ROS). Runtime adaptation is needed in these systems, to cope with component failures and with…

We present an open-source code for the simulation of electron and ion transport for user-defined gas mixtures with static uniform electric and magnetic fields. The program provides microscopic interaction simulation and is interfaced with…

Computational Physics · Physics 2021-09-14 Michele Renda , Dan Andrei Ciubotaru , Calin Iulian Banu

Most existing random walk based network embedding methods often follow only one of two principles, homophily or structural equivalence. In real world networks, however, nodes exhibit a mixture of homophily and structural equivalence, which…

Social and Information Networks · Computer Science 2020-10-27 Chen Cui , Ning Yang , Philip S. Yu

Processes occurring in a radio-frequency (rf) cavity, filled with high pressure gas and interacting with proton beams, have been studied via advanced numerical simulations. Simulations support the experimental program on the hydrogen…

Accelerator Physics · Physics 2018-03-28 Kwangmin Yu , Roman Samulyak , Katsuya Yonehara , Ben Freemire

preCICE is a free/open-source coupling library. It enables creating partitioned multi-physics simulations by gluing together separate software packages. This paper summarizes the development efforts in preCICE of the past five years. During…

We present a novel phase-field model development capability in the open source MOOSE finite element framework. This facility is based on the 'modular free energy' approach in which the phase-field equations are implemented in a general form…

Materials Science · Physics 2017-02-28 Daniel Schwen , Larry K. Aagesen , John W. Peterson , Michael R. Tonks

Multiphysics simulation, which models the interactions between multiple physical processes, and multi-component simulation of complex structures are critical in fields like nuclear and aerospace engineering. Previous studies use numerical…

Machine Learning · Computer Science 2026-01-21 Tao Zhang , Zhenhai Liu , Feipeng Qi , Yongjun Jiao , Tailin Wu

The process of setting up and successfully running Molecular Dynamics Simulations (MDS) is outlined to be incredibly labour and computationally expensive with a very high barrier to entry for newcomers wishing to utilise the benefits and…

Computational Engineering, Finance, and Science · Computer Science 2025-03-17 Jai Geddes Nelson , Xiaochen Liu , Ken Tye Yong

Automated and high-throughput quantum chemical investigations into chemical processes have become feasible in great detail and broad scope. This results in an increase in complexity of the tasks and in the amount of generated data. An…

Automated Machine Learning (AutoML) is used more than ever before to support users in determining efficient hyperparameters, neural architectures, or even full machine learning pipelines. However, users tend to mistrust the optimization…

Machine Learning · Computer Science 2022-07-12 René Sass , Eddie Bergman , André Biedenkapp , Frank Hutter , Marius Lindauer

Emerging compute continuum environments pose new challenges that traditional cloud-centric architectures struggle to address. Latency, bandwidth constraints, and the heterogeneity of edge environments hinder the efficiency of centralized…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-15 Luca De Martini , Dario d'Abate , Alessandro Margara , Gianpaolo Cugola

Open biochemical systems of interacting molecules are ubiquitous in life-related processes. However, established computational methodologies, like molecular dynamics, are still mostly constrained to closed systems and timescales too small…

Quantitative Methods · Quantitative Biology 2025-10-15 Margarita Kostré , Christof Schütte , Frank Noé , Mauricio J. del Razo

OpenFMO framework, an open-source software (OSS) platform for Fragment Molecular Orbital (FMO) method, is extended to multi-physics simulations (MPS). After reviewing the several FMO implementations on distributed computer environments, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2009-09-29 Toshiya Takami , Jun Maki , Jun'ichi Ooba , Yuuichi Inadomi , Hiroaki Honda , Ryutaro Susukita , Koji Inoue , Taizo Kobayashi , Rie Nogita , Mutsumi Aoyagi

Multimedia recommendation systems leverage user-item interactions and multimodal information to capture user preferences, enabling more accurate and personalized recommendations. Despite notable advancements, existing approaches still face…

Information Retrieval · Computer Science 2026-01-19 Ji Dai , Quan Fang , Jun Hu , Desheng Cai , Yang Yang , Can Zhao