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Upcoming astronomical surveys produce imagery that spans many orders of magnitude in spatial scale, requiring scientists to reason fluidly between global structure and local detail. Data from the Vera C. Rubin Observatory exemplifies this…
Analyzing performance within asynchronous many-task-based runtime systems is challenging because millions of tasks are launched concurrently. Especially for long-term runs the amount of data collected becomes overwhelming. We study HPX and…
Creating a vision pipeline for different datasets to solve a computer vision task is a complex and time consuming process. Currently, these pipelines are developed with the help of domain experts. Moreover, there is no systematic structure…
Hyperspectral (HS) imaging presents itself as a non-contact, non-ionizing and non-invasive technique, proven to be suitable for medical diagnosis. However, the volume of information contained in these images makes difficult providing the…
Multi-resolution methods such as Adaptive Mesh Refinement (AMR) can enhance storage efficiency for HPC applications generating vast volumes of data. However, their applicability is limited and cannot be universally deployed across all…
Analyzing the planet at scale with satellite imagery and machine learning is a dream that has been constantly hindered by the cost of difficult-to-access highly-representative high-resolution imagery. To remediate this, we introduce here…
We introduce SurfFlow, an open-source high-throughput workflow package designed for automated first-principles calculations of surface energies in arbitrary crystals. Our package offers a comprehensive solution capable of handling…
Recent advances in digital imaging, e.g., increased number of pixels captured, have meant that the volume of data to be processed and analyzed from these images has also increased. Deep learning algorithms are state-of-the-art for analyzing…
The challenge to fully exploit the potential of existing and upcoming scientific instruments like large single-dish radio telescopes is to process the collected massive data effectively and efficiently. As a "quasi 2D stencil computation"…
Remote sensing images are useful for a wide variety of planet monitoring applications, from tracking deforestation to tackling illegal fishing. The Earth is extremely diverse -- the amount of potential tasks in remote sensing images is…
Large datasets of sub-meter aerial imagery represented as orthophoto mosaics are widely available today, and these data sets may hold a great deal of untapped information. This imagery has a potential to locate several types of features;…
Spatially-resolved omics-data enable researchers to precisely distinguish cell types in tissue and explore their spatial interactions, enabling deep understanding of tissue functionality. To understand what causes or deteriorates a disease…
Earth observation analytics have the potential to transform many sectors. However, due to limited ground connections, it currently takes hours to days to download and analyze Earth observation data, diminishing the value of data for…
We introduce a new model for the task mapping problem to aid in the systematic design of algorithms for heterogeneous systems including, but not limited to, CPUs, GPUs and FPGAs. A special focus is set on the communication between the…
Cameras in modern devices such as smartphones, satellites and medical equipment are capable of capturing very high resolution images and videos. Such high-resolution data often need to be processed by deep learning models for cancer…
This paper describes a scalable active learning pipeline prototype for large-scale brain mapping that leverages high performance computing power. It enables high-throughput evaluation of algorithm results, which, after human review, are…
Deep learning techniques are becoming increasingly important to solve a number of image processing tasks. Among common algorithms, Convolutional Neural Networks and Recurrent Neural Networks based systems achieve state of the art results on…
Distributed Computation has been a recent trend in engineering research. Parallel Computation is widely used in different areas of Data Mining, Image Processing, Simulating Models, Aerodynamics and so forth. One of the major usage of…
Current VHR(Very High Resolution) satellite images enable the detailed monitoring of the earth and can capture the ongoing works of railway construction. In this paper, we present an integrated framework applied to monitoring the railway…
Hyperparameter tuning of multi-stage pipelines introduces a significant computational burden. Motivated by the observation that work can be reused across pipelines if the intermediate computations are the same, we propose a pipeline-aware…