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We undertake an extensive numerical investigation of the graph spectra of thousands regular graphs, a set of random Erd\"os-R\'enyi graphs, the two most popular types of complex networks and an evolving genetic network by using novel…

Information Theory · Computer Science 2015-01-27 Hector Zenil , Narsis A. Kiani , Jesper Tegnér

Node embeddings map graph vertices into low-dimensional Euclidean spaces while preserving structural information. They are central to tasks such as node classification, link prediction, and signal reconstruction. A key goal is to design…

Machine Learning · Computer Science 2026-02-18 Valentin de Bassompierre , Jean-Charles Delvenne , Laurent Jacques

Community structure is an important property that captures inhomogeneities common in large networks, and modularity is one of the most widely used metrics for such community structure. In this paper, we introduce a principled methodology,…

Social and Information Networks · Computer Science 2018-01-08 Luca Baldesi , Athina Markopoulou , Carter T. Butts

Graph partitioning problems emerge in a wide variety of complex systems, ranging from biology to finance, but can be rigorously analyzed and solved only for a few graph ensembles. Here, an ensemble of equitable graphs, i.e. random graphs…

Social and Information Networks · Computer Science 2017-10-25 Paolo Barucca

Graph spectral techniques for measuring graph similarity, or for learning the cluster number, require kernel smoothing. The choice of kernel function and bandwidth are typically chosen in an ad-hoc manner and heavily affect the resulting…

Machine Learning · Statistics 2019-12-20 Diego Granziol , Robin Ru , Stefan Zohren , Xiaowen Dong , Michael Osborne , Stephen Roberts

Graph summarization via node grouping is a popular method to build concise graph representations by grouping nodes from the original graph into supernodes and encoding edges into superedges such that the loss of adjacency information is…

Social and Information Networks · Computer Science 2022-11-09 Arpit Merchant , Michael Mathioudakis , Yanhao Wang

The study of spectral graph determination is a fascinating area of research in spectral graph theory and algebraic combinatorics. This field focuses on examining the spectral characterization of various classes of graphs, developing methods…

Combinatorics · Mathematics 2025-04-14 Igal Sason , Noam Krupnik , Suleiman Hamud , Abraham Berman

What is the best way to match the nodes of two graphs? This graph alignment problem generalizes graph isomorphism and arises in applications from social network analysis to bioinformatics. Some solutions assume that auxiliary information on…

Information Retrieval · Computer Science 2021-06-14 Judith Hermanns , Anton Tsitsulin , Marina Munkhoeva , Alex Bronstein , Davide Mottin , Panagiotis Karras

We propose a new method to recover global information about a network of interconnected dynamical systems based on observations made at a small number (possibly one) of its nodes. In contrast to classical identification of full graph…

Dynamical Systems · Mathematics 2016-10-18 A. Mauroy , J. Hendrickx

Stationarity is a cornerstone property that facilitates the analysis and processing of random signals in the time domain. Although time-varying signals are abundant in nature, in many practical scenarios the information of interest resides…

Systems and Control · Computer Science 2017-10-11 Antonio G. Marques , Santiago Segarra , Geert Leus , Alejandro Ribeiro

A large driver of the complexity of graph learning is the interplay between structure and features. When analyzing the expressivity of graph neural networks, however, existing approaches ignore features in favor of structure, making it…

Machine Learning · Computer Science 2026-03-04 Martin Carrasco , Olga Zaghen , Kavir Sumaraj , Erik Bekkers , Bastian Rieck

Graph neural networks (GNNs) are a popular class of machine learning models whose major advantage is their ability to incorporate a sparse and discrete dependency structure between data points. Unfortunately, GNNs can only be used when such…

Machine Learning · Computer Science 2020-06-22 Luca Franceschi , Mathias Niepert , Massimiliano Pontil , Xiao He

A graph is a powerful concept for representation of relations between pairs of entities. Data with underlying graph structure can be found across many disciplines and there is a natural desire for understanding such data better. Deep…

Machine Learning · Computer Science 2019-01-25 Martin Simonovsky

Graph learning from data represents a canonical problem that has received substantial attention in the literature. However, insufficient work has been done in incorporating prior structural knowledge onto the learning of underlying…

Machine Learning · Statistics 2019-04-23 Sandeep Kumar , Jiaxi Ying , José Vinícius de M. Cardoso , Daniel Palomar

Discovering low-dimensional structure in real-world networks requires a suitable null model that defines the absence of meaningful structure. Here we introduce a spectral approach for detecting a network's low-dimensional structure, and the…

Social and Information Networks · Computer Science 2021-05-24 Mark D. Humphries , Javier A. Caballero , Mat Evans , Silvia Maggi , Abhinav Singh

Graph Neural Networks (GNNs) have achieved great success on a node classification task. Despite the broad interest in developing and evaluating GNNs, they have been assessed with limited benchmark datasets. As a result, the existing…

Machine Learning · Computer Science 2022-12-29 Seiji Maekawa , Koki Noda , Yuya Sasaki , Makoto Onizuka

Graph classification aims to categorise graphs based on their structure and node attributes. In this work, we propose to tackle this task using tools from graph signal processing by deriving spectral features, which we then use to design…

Machine Learning · Computer Science 2023-06-07 Felix L. Opolka , Yin-Cong Zhi , Pietro Liò , Xiaowen Dong

This paper proposes a scalable algorithmic framework for spectral reduction of large undirected graphs. The proposed method allows computing much smaller graphs while preserving the key spectral (structural) properties of the original…

Data Structures and Algorithms · Computer Science 2018-12-24 Zhiqiang Zhao , Yongyu Wang , Zhuo Feng

Learning distributions of graphs can be used for automatic drug discovery, molecular design, complex network analysis, and much more. We present an improved framework for learning generative models of graphs based on the idea of deep state…

Machine Learning · Computer Science 2021-12-07 Julian Stier , Michael Granitzer

How can the `affinity' or `strength' of ties of a random graph be characterized and compactly represented? How can concepts like Fourier and inverse-Fourier like transform be developed for graph data? To do so, we introduce a new…

Statistics Theory · Mathematics 2015-12-11 Subhadeep Mukhopadhyay