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Biological activities are often seen entrained onto the day-night and other celestial mechanical cycles (e.g., seasonal and lunar), but studies on the origin of life have largely not accounted for such periodic external environmental…

Chaotic Dynamics · Physics 2024-08-21 Fan Zhang

We study the probabilities of evolution based on random mutations and natural selection. We conclude that evolution to multicellular eukaryots, or even prokaryots, is unlikely to be the result of only random mutations. Complex organisms…

Populations and Evolution · Quantitative Biology 2007-05-23 B. Hoeneisen , G. Trueba

The sequence of nucleotide bases occurring in an organism's DNA is often regarded as a codescript for its construction. However, information in a DNA sequence can only be regarded as a codescript relative to an operational biochemical…

Other Quantitative Biology · Quantitative Biology 2013-08-12 Peter R. Wills

Living cells dynamically modulate the local morphologies of their actin cytoskeletons to perform biological functions, including force transduction, intracellular transport, and cell division. A major challenge is to understand how diverse…

Biological Physics · Physics 2018-12-07 Simon L. Freedman , Glen M. Hocky , Shiladitya Banerjee , Aaron R. Dinner

We introduce a simple "patchy particle" model to study the thermodynamics and dynamics of self-assembly of homomeric protein complexes. Our calculations allow us to rationalize recent results for dihedral complexes. Namely, why evolution of…

The cells and tissues that make up our body juggle contradictory mechanical demands. It is crucial for their survival to be able to withstand large mechanical loads, but it is equally crucial for them to produce forces and actively change…

Biological Physics · Physics 2019-03-22 Federica Burla , Yuval Mulla , Bart E. Vos , Anders Aufderhorst-Roberts , Gijsje H. Koenderink

The development of prebiotic homochirality on early-Earth or another planetary platform may be viewed as a critical phenomenon. It is shown, in the context of spatio-temporal polymerization reaction networks, that environmental effects --…

Astrophysics · Physics 2008-11-26 Marcelo Gleiser , Joel Thorarinson

The chiral puzzle of biological molecules is thought to be closely related to the origin of life and is still a mystery so far. Previously, we proposed a new model on the origin of life, Nebula-Relay hypothesis, which assumed that the life…

Popular Physics · Physics 2022-03-01 Lei Feng

Autonomous locomotion is a ubiquitous phenomenon in biology and in physics of active systems at microscopic scale. This includes prokaryotic, eukaryotic cells (crawling and swimming) and artificial swimmers. An outstanding feature is the…

Soft Condensed Matter · Physics 2021-12-24 A. Farutin , M. S. Rizvi , W. F. Hu , T. S. Lin , S. Rafai , C. Misbah

The presence of chirality in the main molecules of life may well be not just a structural artifact, but of pure biological advantage. The possibility of the existence of a phenomenon of a special mode of interaction, labeled as "chiral…

Biological Physics · Physics 2007-05-23 G. Gilat

Biological macromolecules, proteins and nucleic acids are composed exclusively of chirally pure monomers. The chirality consensus appears vital for life and it has even been considered as a prerequisite of life. However the primary cause…

Populations and Evolution · Quantitative Biology 2009-06-02 Salla Jaakkola , Vivek Sharma , Arto Annila

The breadth of topics that encompass the search for life has expanded and evolved significantly since the emergence of the field of astrobiology. Initial astrobiology centered investigations focused on detecting biosignatures in the Martian…

Instrumentation and Methods for Astrophysics · Physics 2025-11-24 Benjamin J. Farcy , Darryl Z. Seligman , Kathleen E. Mandt , John W. Noonan , Sarah E. Anderson

The network of biochemical reactions inside living organisms is characterized by an overwhelming complexity which stems from the sheer number of reactions and from the complicated topology of biochemical cycles. However the high speed of…

Biological Physics · Physics 2009-10-30 Edoardo Milotti , Alessio Del Fabbro , Roberto Chignola

Planetary systems such as our own are formed after a long process where matter condenses from diffuse clouds to stars, planets, asteroids, comets and residual dust, undergoing dramatic changes in physical and chemical state in less than a…

Solar and Stellar Astrophysics · Physics 2022-12-21 C. Ceccarelli , C. Codella , N. Balucani , D. Bockelée-Morvan , E. Herbst , C. Vastel , P. Caselli , C. Favre , B. Lefloch , K. Öberg

Bioconvection, a phenomenon arising from the collective motion of motile microorganisms, plays a crucial role in shaping microbial distributions, fluid dynamics, and bloom formation in aquatic environments. While extensive research has…

Biological Physics · Physics 2025-04-15 Samarendu Biswas , Sachidananda Mahato , Jayabrata Dhar

Bacterial communities such as biofilms are widely recognised as being important for survival and persistence of bacteria in harsh environments. Mechanistic models of biofilm growth indicate that the way in which the surface is seeded can…

Quantitative Methods · Quantitative Biology 2007-05-23 Leah R. Johnson

The interaction between a flexible polymer in good solvent and smaller associating solute molecules such as amphiphiles (surfactants) is considered theoretically. Attractive correlations, induced in the polymer because of the interaction,…

Soft Condensed Matter · Physics 2007-05-23 H. Diamant , D. Andelman

The dominant paradigm in origin of life research is that of an RNA world. However, despite experimental progress towards the spontaneous formation of RNA, the RNA world hypothesis still has its problems. Here, we introduce a novel…

Molecular Networks · Quantitative Biology 2017-01-31 Wim Hordijk

In living cells, cycles of formation and dissolution of liquid droplets can mediate biological functions such as DNA repair. However, the minimal physicochemical prerequisite for such droplet oscillations remains elusive. Here, we present a…

Soft Condensed Matter · Physics 2025-03-17 Ivar S. Haugerud , Hidde D. Vuijk , Job Boekhoven , Christoph A. Weber

The origin of life is shrouded in mystery, with few surviving clues, obscured by evolutionary competition. Previous reviews have touched on the complementary approaches of top-down and bottom-up synthetic biology to augment our…

Populations and Evolution · Quantitative Biology 2022-07-18 Ivan Ivanov , Stoyan K. Smoukov , Ehsan Nourafkan , Katharina Landfester , Petra Schwille