English
Related papers

Related papers: A Prerequisite for Life

200 papers

The improbability of a spontaneously generated self-assembling molecule has suggested that life began with a set of simpler, collectively replicating elements, such as an enclosed autocatalytic set of polymers (or protocell). Since…

Adaptation and Self-Organizing Systems · Physics 2013-08-26 Liane Gabora

All life, including cells and artificial protocells, must integrate diverse molecules into a single unit in order to reproduce. Despite expected pressure to evolve a simple system with the fastest replication speed, the mechanism by which…

Cell Behavior · Quantitative Biology 2014-08-12 Atsushi Kamimura , Kunihiko Kaneko

One of the great challenges in science is determining when, where, why, and how life first arose as well as the form taken by this life. In the present study, life was assumed to be (1) bounded, (2) replicating, (3) able to inherit…

Other Quantitative Biology · Quantitative Biology 2022-09-13 Takeshi Ishida

We present a simple mathematical model that captures the evolutionary capabilities of a prebiotic compartment or protocell. In the model the protocell contains an autocatalytic set whose chemical dynamics is coupled to the growth-division…

Populations and Evolution · Quantitative Biology 2023-10-31 Angad Yuvraj Singh , Sanjay Jain

Unicellular microscopic organisms living in aqueous environments outnumber all other creatures on Earth. A large proportion of them are able to self-propel in fluids with a vast diversity of swimming gaits and motility patterns. In this…

Biological Physics · Physics 2021-07-14 Marcos F. Velho Rodrigues , Maciej Lisicki , Eric Lauga

We propose a novel definition of life in terms of which its emergence in the universe is expected, and its ever-creative open-ended evolution is entailed by no law. Living organisms are Kantian Wholes that achieve Catalytic Closure,…

Populations and Evolution · Quantitative Biology 2024-04-11 Stuart Kauffman , Andrea Roli

The minimal requirements for life are autopoiesis and cognition. We propose autopoietic models with cognition and perform three classes of evolutionary simulation. In our models the plasticity of the metabolic cycle and the regulation…

Cell Behavior · Quantitative Biology 2015-12-29 Hirotaka Matsufuji , Osamu Narikiyo

The origin of life is often framed primarily as a chemical problem, yet life's defining feature is evolution. Advances in geochemistry, prebiotic chemistry, and molecular biology have produced diverse scenarios for the emergence of genomes,…

Many microorganisms live and evolve in complex fluids. Examples include mammalian spermatozoa in cervical mucus, worms (e.g., \textit{C. elegans}) in wet soil, and bacteria (e.g., \textit{H. pylori}) in our stomach lining. Due to the…

Fluid Dynamics · Physics 2022-10-21 Paulo E. Arratia

Given that the macromolecular building blocks of life were likely produced photochemically in the presence of ultraviolet (UV) light, we identify some general constraints on which stars produce sufficient UV for this photochemistry. We…

Earth and Planetary Astrophysics · Physics 2018-08-09 Paul Brandon Rimmer , Jianfeng Xu , Samantha Thompson , Ed Gillen , John Sutherland , Didier Queloz

The biological molecules delivered to Earth on the board of meteorites and comets were called one of the possible causes of the origin of life. Therefore, our understanding of the routes of formation of biomolecules in space should shed the…

Earth and Planetary Astrophysics · Physics 2021-03-29 Serge A. Krasnokutski

The phenomenon of life is discussed within a framework of its origin as defined by four hypotheses. The 1. hypothesis says: Life, as we know, is (H-C-N-O) based and relies on the number of bulk (Na-Mg-P-S-Cl-K-Ca) and trace elements…

Astrophysics of Galaxies · Physics 2020-11-25 Vlado Valkovic , Jasmina Obhodas

The biomolecules in and around a living cell -- proteins, nucleic acids, lipids, carbohydrates -- continuously sample myriad conformational states that are thermally accessible at physiological temperatures. Simultaneously, a given…

Biomolecules · Quantitative Biology 2014-07-15 Cameron Mura , Charles E. McAnany

An object-oriented combinator chemistry was used to construct an artificial organism with a system architecture possessing characteristics necessary for organisms to evolve into more complex forms. This architecture supports modularity by…

Neural and Evolutionary Computing · Computer Science 2018-05-17 Lance R. Williams

How life started on Earth is an unsolved mystery. There are various hypotheses for the location ranging from outer space to the seafloor, subseafloor or potentially deeper. Here, we applied extensive ab initio molecular dynamics (AIMD)…

Biological Physics · Physics 2024-10-24 Tao Li , Nore Stolte , Renbiao Tao , Dimitri A. Sverjensky , Isabelle Daniel , Ding Pan

The search for life elsewhere in the universe is a pivotal question in modern science. However, to address whether life is common in the universe we must first understand the likelihood of abiogenesis by studying the origin of life on…

Astrophysics · Physics 2008-11-11 Marcelo Gleiser , Sara Imari Walker

Spontaneous self-assembly in molecular systems is a fundamental route to both biological and engineered soft matter. Simple micellisation, emulsion formation, and polymer mixing principles are well understood. However, the principles behind…

Soft Condensed Matter · Physics 2021-09-21 Alberto Scacchi , Sousa Javan Nikkhah , Maria Sammalkorpi , Tapio Ala-Nissila

For more than 100 years, humanity (both specialists and enthusiastic laics) has been searching for extraterrestrial life hoping we are not alone. The first step in the quest for extraterrestrial life is to define what and where exactly to…

Other Quantitative Biology · Quantitative Biology 2018-10-25 Marko Popovic

Life is a complex biological phenomenon represented by numerous chemical, physical and biological processes performed by a biothermodynamic system/cell/organism. Both living organisms and inanimate objects are subject to aging, a biological…

Other Quantitative Biology · Quantitative Biology 2018-01-25 Marko Popovic

Carbon, Hydrogen, Nitrogen, Oxygen, Phosphorus and Sulfur (CHNOPS) play key roles in the origin and proliferation of life on Earth. Given the universality of physics and chemistry, not least the ubiquity of water as a solvent and carbon as…

Earth and Planetary Astrophysics · Physics 2022-03-21 Sebastiaan Krijt , Mihkel Kama , Melissa McClure , Johanna Teske , Edwin A. Bergin , Oliver Shorttle , Kevin J. Walsh , Sean N. Raymond