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Predicting the rheological behavior of associative polymers bridging colloidal particles into transient networks is fundamentally challenging because the coupled spatiotemporal scales prevent efficient molecular-fidelity modeling. We…

Soft Condensed Matter · Physics 2026-02-17 Jalal Abdolahi , Dominic M. Robe , Ronald G. Larson , Elnaz Hajizadeh

This Letter identifies the physical mechanism for the quench of turbulent resistivity in 2D MHD. Without an imposed, ordered magnetic field, a multi-scale, blob-and-barrier structure of magnetic potential forms spontaneously. Magnetic…

Fluid Dynamics · Physics 2019-05-07 Xiang Fan , P. H. Diamond , L. Chacón

In a system of Self-Propelled Particles (SPPs), the combination of self-propulsion and excluded volume effects can result in a phase separation called Motility-Induced Phase Separation (MIPS). Previous studies reported that MIPS is one of…

Soft Condensed Matter · Physics 2025-07-03 Hiroya Yamamoto

We present and study a minimal structure-based model for the self-assembly of peptides into ordered beta-sheet-rich fibrils. The peptides are represented by unit-length sticks on a cubic lattice and interact by hydrogen bonding and…

Biological Physics · Physics 2013-03-12 A. Irbäck , S. Æ. Jónsson , N. Linnemann , B. Linse , S. Wallin

Understanding interactions between microparticles and lipid membranes is of increasing importance, especially for unraveling the influence of microplastics on our health and environment. Here, we study how a short-ranged adhesive force…

Soft Condensed Matter · Physics 2017-10-11 Casper van der Wel , Doris Heinrich , Daniela J. Kraft

Polymer chains adsorbed onto oppositely charged spherical colloidal particles can significantly modify the particle-particle interactions. For sufficient amounts of added polymers, the original electrostatic repulsion can even turn into an…

Soft Condensed Matter · Physics 2015-05-13 D. Truzzolillo , F. Bordi , F. Sciortino , C. Cametti

Brownian particles interacting via repulsive soft-core potentials can spontaneously aggregate, despite repelling each other, and form periodic crystals of particle clusters. We study this phenomenon in low-dimensional situations (one and…

We describe simulations of active Brownian particles carried out to explore how dynamics and clustering are influenced by particle shape. Our particles are composed of four disks, held together by springs, whose relative size can be varied.…

Soft Condensed Matter · Physics 2021-12-07 Joshua Eglinton , Mike I. Smith , Michael R. Swift

Evolution of the spatial arrangement of cells in a primary culture of cardiac tissue derived from newborn rats was studied experimentally over extended period. It was found that cells attract each other spontaneously to form a clustered…

Cell Behavior · Quantitative Biology 2009-11-13 Takahiro Harada , Akihiro Isomura , Kenichi Yoshikawa

We present a model for the spontaneous formation of a striated pattern in polymerizing microtubule solutions. It describes the buckling of a single microtubule (MT) bundle within an elastic network formed by other similarly aligned and…

Biological Physics · Physics 2007-06-13 Yongxing Guo , Yifeng Liu , Jay X. Tang , James M. Valles

Nanoparticles introduced in living cells are capable of strongly promoting the aggregation of peptides and proteins. We use here molecular dynamics simulations to characterise in detail the process by which nanoparticle surfaces catalyse…

Biomolecules · Quantitative Biology 2010-06-08 Stefan Auer , Antonio Trovato , Michele Vendruscolo

Crowded environments modify the diffusion of macromolecules, generally slowing their movement and inducing transient anomalous subdiffusion. The presence of obstacles also modifies the kinetics and equilibrium behavior of tracers. While…

We model a particulate flow of constant velocity through confined geometries, ranging from a single channel to a bundle of $N_c$ identical coupled channels, under conditions of reversible blockage. Quantities of interest include the exiting…

Statistical Mechanics · Physics 2019-06-28 Chloé Barré , Gregory Page , Julian Talbot , Pascal Viot

There are two modes by which clusters of aggregating particles can coalesce: The clusters can merge either (i) by the Ostwald ripening process in which particles diffuse from one cluster to the other whilst the cluster centres remain…

Soft Condensed Matter · Physics 2014-05-13 Andrey Pototsky , Uwe Thiele , Andrew J. Archer

Rigid particles pack into structures, such as sand dunes on the beach, whose overall stability is determined by the average number of contacts between particles. However, when packing spatially extended objects with flexible shapes,…

Soft Condensed Matter · Physics 2009-11-13 Ling-Nan Zou , Xiang Cheng , Mark L. Rivers , Heinrich M. Jaeger , Sidney R. Nagel

In the presence of an obstacle, active particles condensate into a surface "wetting" layer due to persistent motion. If the obstacle is asymmetric, a rectification current arises in addition to wetting. Asymmetric geometries are therefore…

Soft Condensed Matter · Physics 2023-06-06 Mauricio Rojas-Vega , Pablo de Castro , Rodrigo Soto

A model predicting the structure of repulsive, spherically symmetric, monodisperse particles confined between two walls is presented. We study the buckling transition of a single flat layer as the double layer state develops. Experimental…

Condensed Matter · Physics 2009-10-22 T Chou , David R. Nelson

In the field of freezing colloidal suspensions, it is important to understand the particle-scale behavior of particle packing. Here, we reveal the dynamics of particle packing by identifying the behavior of each single particle in situ. The…

Materials Science · Physics 2017-03-08 Jiaxue You , Jincheng Wang , Lilin Wang , Ziren Wang , Zhijun Wang , Junjie Li , Xin Lin

We present a Brownian dynamics study of a 2d bath of active particles interacting among each other through usual steric interactions and, additionally, via non-reciprocal avoidant orientational interactions. We motivate them by the fact…

Soft Condensed Matter · Physics 2022-10-24 Milos Knezevic , Till Welker , Holger Stark

To explore the coupling between a growing population of microorganisms such as E. coli and a nonuniform nutrient distribution, we formulate a minimalistic model. It consists of active Brownian particles that divide and grow at a…

Biological Physics · Physics 2024-01-11 Till Welker , Holger Stark
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