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Fluctuations are inherent to biological systems, arising from the stochastic nature of molecular interactions, and influence various aspects of system behavior, stability, and robustness. These fluctuations can be categorized as intrinsic,…

Molecular Networks · Quantitative Biology 2024-08-23 Manuel Eduardo Hernández-García , Mariana Gómez-Schiavon , Jorge Velázquez-Castro

The influence of dissipation on the fluctuation statistics of the total energy is investigated through both a phenomenological and a stochastic model for dissipative energy-transfer through a cascade of states. In equilibrium the states…

Statistical Mechanics · Physics 2013-06-27 Eric Bertin , Peter C. W. Holdsworth

Stochastic thermodynamics as reviewed here systematically provides a framework for extending the notions of classical thermodynamics like work, heat and entropy production to the level of individual trajectories of well-defined…

Statistical Mechanics · Physics 2015-06-05 Udo Seifert

We consider incorporation of particle detachment in Smoluchowski model of colloidal growth. Two approaches are considered, utilizing phenomenological rate equation and exact large-time results. Our main conclusion is that the value of the…

Materials Science · Physics 2010-09-22 Dima Mozyrsky , Vladimir Privman

The force per unit area on the surface of a colloidal particle is a fundamental dynamical quantity in the mechanics and statistical mechanics of colloidal suspensions. Here we compute it in the limit of slow viscous flow for a suspension of…

Soft Condensed Matter · Physics 2018-02-21 Rajesh Singh , R. Adhikari

Out-of-equilibrium systems continuously generate entropy, with its rate of production being a fingerprint of non-equilibrium conditions. In small-scale dissipative systems subject to thermal noise, fluctuations of entropy production are…

Statistical Mechanics · Physics 2023-01-19 Prajwal Padmanabha , Daniel Maria Busiello , Amos Maritan , Deepak Gupta

Thermal fluctuations cause perturbations of fluid-fluid interfaces and highly nonlinear hydrodynamics in multiphase flows. In this work, we develop a novel multiphase smoothed dissipative particle dynamics model. This model accounts for…

The dispersion of a passive colloid immersed in a bath of non-interacting and non-Brownian run-and-tumble microswimmers in two dimensions is analyzed using stochastic simulations and an asymptotic theory, both based on a minimal model of…

Soft Condensed Matter · Physics 2024-03-18 Tanumoy Dhar , David Saintillan

Recently, the fundamental laws of thermodynamics have been reconsidered for small systems. The discovery of the fluctuation relations has spurred theoretical and experimental studies on thermodynamics of systems with few degrees of freedom.…

Statistical Mechanics · Physics 2021-08-10 J. V. Koski , T. Sagawa , O. -P. Saira , Y. Yoon , A. Kutvonen , P. Solinas , M. Möttönen , T. Ala-Nissila , J. P. Pekola

Hydrodynamic flows are often generated in colloidal suspensions. Since colloidal particles are frequently used to construct stochastic heat engines, we study how the hydrodynamic flows influence the output parameters of the engine. We study…

Statistical Mechanics · Physics 2025-04-15 P. S. Pal , Sourabh Lahiri , Arnab Saha

We show how the Smoluchowski dynamics of a colloidal Brownian particle suspended in a molecular solvent can be reached starting from the microscopic Liouvillian evolution of the full classical model in the high friction limit. The…

Soft Condensed Matter · Physics 2019-04-08 Riccardo Fantoni

We derive a general lower bound on distributions of entropy production in interacting active matter systems. The bound is tight in the limit that interparticle correlations are small and short-ranged, which we explore in four canonical…

Statistical Mechanics · Physics 2021-02-03 Trevor GrandPre , Katherine Klymko , Kranthi K. Mandadapu , David T. Limmer

In the last ten years, a number of ``Conventional Fluctuation Theorems'' have been derived for systems with deterministic or stochastic dynamics, in a transient or in a non-equilibrium stationary state. These theorems gave explicit…

Statistical Mechanics · Physics 2007-05-23 R. van Zon , E. G. D. Cohen

Fluctuations in fluid velocity and fluctuations in electric fields may both give rise to forces acting on small particles in colloidal suspensions. Such forces in part determine the thermodynamic stability of the colloid. At the classical…

Soft Condensed Matter · Physics 2013-05-29 D. Drosdoff , A. Widom

Spontaneous persistent motions driven by active processes play a central role to maintain the living cells far from equilibrium. In the majority of the research works, the steady state dynamics of an active system has been described in…

Statistical Mechanics · Physics 2020-07-01 Subhasish Chaki , Rajarshi Chakrabarti

We consider a charged Brownian gas under the influence of external and non uniform electric, magnetic and mechanical fields, immersed in a non uniform bath temperature. With the collision time as an expansion parameter, we study the…

Statistical Mechanics · Physics 2013-08-01 R. E. Lagos , Tania P. Simões

Small systems in contact with a heat bath evolve by stochastic dynamics. Here we show that, when one such small system is weakly coupled to another one, it is possible to infer the presence of such weak coupling by observing the violation…

Statistical Mechanics · Physics 2016-11-07 Deepak Gupta , Sanjib Sabhapandit

A Hamiltonian-based model of many harmonically interacting massive particles that are subject to linear friction and coupled to heat baths at different temperatures is used to study the dynamic approach to equilibrium and non-equilibrium…

Statistical Mechanics · Physics 2020-09-17 Roland R. Netz

According to a traditional point of view Boltzmann entropy is intimately related to linear Fokker-Planck equations (Smoluchowski, Klein-Kramers, and Rayleigh equations) that describe a well-known nonequilibrium phenomenon: (normal) Brownian…

General Physics · Physics 2017-01-11 A. O. Bolivar

The expressions for entropy production, free energy, and entropy extraction rates are derived for a Brownian particle that walks in an underdamped medium. Our analysis indicates that as long as the system is driven out of equilibrium, it…

Statistical Mechanics · Physics 2021-02-18 Mesfin Asfaw Taye
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