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ProfileGLMM is an R package integrating Generalised Linear Mixed Models (GLMMs) as the outcome model for Bayesian profile regression. This statistical framework simultaneously i) explains the variation in the outcome and ii) clusters the…

Methodology · Statistics 2026-04-23 Matteo Amestoy , Mark A. van de Wiel , Wessel N. van Wieringen

In medical risk modeling, typical data are "scarce": they have relatively small number of training instances (N), censoring, and high dimensionality (M). We show that the problem may be effectively simplified by reducing it to bipartite…

Machine Learning · Computer Science 2012-01-31 Marina Sapir

The semiparametric accelerated failure time (AFT) model offers a direct and interpretable alternative to the Cox proportional hazards model, yet practical diagnostic tools for this framework remain limited. We introduce afttest, an R…

Computation · Statistics 2026-03-09 Woojung Bae , Dongrak Choi , Jun Yan , Sangwook Kang

Motivation: Model selection is a ubiquitous challenge in statistics. For penalized models, model selection typically entails tuning hyperparameters to maximize a measure of fit or minimize out-of-sample prediction error. However, these…

Methodology · Statistics 2025-05-29 Priyam Das , Sarah Robinson , Christine B. Peterson

COVID-19 had an unprecedented impact on scientific collaboration. The pandemic and its broad response from the scientific community has forged new relationships among domain experts, mathematical modelers, and scientific computing…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-11 Nicholson Collier , Justin M. Wozniak , Abby Stevens , Yadu Babuji , Mickaël Binois , Arindam Fadikar , Alexandra Würth , Kyle Chard , Jonathan Ozik

In statistics, it is important to have realistic data sets available for a particular context to allow an appropriate and objective method comparison. For many use cases, benchmark data sets for method comparison are already available…

Applications · Statistics 2024-05-30 Maria Thurow , Ina Dormuth , Christina Sauer , Marc Ditzhaus , Markus Pauly

This paper introduces a novel methodology for Feature Selection for Functional Classification, FSFC, that addresses the challenge of jointly performing feature selection and classification of functional data in scenarios with categorical…

The credit scoring industry has a long tradition of using statistical tools for loan default probability prediction and domain specific standards have been established long before the hype of machine learning. Although several commercial…

Computation · Statistics 2020-07-03 Gero Szepannek

Precision medicine is an evolving area in the medical field and rely on biomarkers to make patient enrichment decisions, thereby providing drug development direction. A traditional statistical approach is to find the cut-off that leads to…

Methodology · Statistics 2025-04-14 Gina D'Angelo , Xiaowen Tian , Chuyu Deng , Xian Zhou

Preprocessing leakage arises when scaling, imputation, or other data-dependent transformations are estimated before resampling, inflating apparent performance while remaining hard to detect. We present fastml, an R package that provides a…

Computation · Statistics 2026-04-14 Selcuk Korkmaz , Dincer Goksuluk , Eda Karaismailoglu

In the last few decades, the size of spatial and spatio-temporal datasets in many research areas has rapidly increased with the development of data collection technologies. As a result, classical statistical methods in spatial statistics…

Other Statistics · Statistics 2022-11-08 Sameh Abdulah , Faten Alamri , Pratik Nag , Ying Sun , Hatem Ltaief , David E. Keyes , Marc G. Genton

In the context of paid research studies and clinical trials, budget considerations often require patient sampling from available populations which comes with inherent constraints. We introduce the R package CDsampling, which is the first to…

Computation · Statistics 2025-09-30 Yifei Huang , Liping Tong , Jie Yang

Composite endpoints are widely used as primary endpoints in clinical trials. Designing trials with time-to-event endpoints can be particularly challenging because the proportional hazard assumption usually does not hold when using a…

Methodology · Statistics 2022-11-07 Jordi Cortés Martinez , Marta Bofill Roig , Guadalupe Gómez Melis

The increasing need for causal analysis in large-scale industrial datasets necessitates the development of efficient and scalable causal algorithms for real-world applications. This paper addresses the challenge of scaling causal algorithms…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-23 Vishal Verma , Vinod Reddy , Jaiprakash Ravi

Graphical models provide powerful tools to uncover complicated patterns in multivariate data and are commonly used in Bayesian statistics and machine learning. In this paper, we introduce the R package BDgraph which performs Bayesian…

Machine Learning · Statistics 2019-05-14 Reza Mohammadi , Ernst C. Wit

Deep neural networks are vulnerable to adversarial examples, which dramatically alter model output using small input changes. We propose Neural Fingerprinting, a simple, yet effective method to detect adversarial examples by verifying…

Machine Learning · Computer Science 2019-06-18 Sumanth Dathathri , Stephan Zheng , Tianwei Yin , Richard M. Murray , Yisong Yue

The FBMS R package facilitates Bayesian model selection and model averaging in complex regression settings by employing a variety of Monte Carlo model exploration methods. At its core, the package implements an efficient Mode Jumping Markov…

Methodology · Statistics 2025-09-03 Florian Frommlet , Jon Lachmann , Geir Storvik , Aliaksandr Hubin

The Process Reward Model (PRM) plays a crucial role in mathematical reasoning tasks, requiring high-quality supervised process data. However, we observe that reasoning steps generated by Large Language Models (LLMs) often fail to exhibit…

Artificial Intelligence · Computer Science 2025-08-25 Yulan Hu , Sheng Ouyang , Jinman Zhao , Yong Liu

The integration of sequencing data with clinical information is a widely accepted strategy in bioinformatics and health informatics. Despite advanced databases and sophisticated tools for processing omics data, challenges remain in handling…

Quantitative Methods · Quantitative Biology 2023-08-10 Ziyu Zhu , Ximing Xu

In this paper, we extend the vertical modeling approach for the analysis of survival data with competing risks to incorporate a cured fraction in the population, that is, a proportion of the population for which none of the competing events…

Methodology · Statistics 2015-08-18 M. A. Nicolaie , J. M. G. Taylor , C. Legrand
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