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Density functional theory and density functional tight-binding are applied to model electron transport in copper nanowires of approximately 1 nm and 3 nm diameters with varying crystal orientation and surface termination. The copper…

Nanopores spanning synthetic membranes have been used as key components in proof-of-principle nanofluidic applications, particularly those involving manipulation of biomolecules or sequencing of DNA. The only practical way of manipulating…

Mesoscale and Nanoscale Physics · Physics 2016-09-21 Tom Chou

We develop a simulational methodology allowing for simulation of the pressure-driven flow in the pore with flat and polymer-modified walls. Our approach is based on dissipative particle dynamics and we combine earlier ideas of fluid-like…

Soft Condensed Matter · Physics 2016-07-07 J. M. Ilnytskyi , P. Bryk , A. Patrykiejew

This study employs modified Poisson-Boltzmann theory to systematically investigate the influence of zwitterionic osmolyte additives to an electrolyte solution on disjoining pressure and electric differential capacitance within charged…

Soft Condensed Matter · Physics 2025-06-30 Victoria A. Vasileva , Daria A. Mazur , Petr E. Brandyshev , Yury A. Budkov

We consider an anisotropically two-dimensional diffusion of a charged molecule (particle) through a large biological channel under an external voltage. The channel is modeled as a cylinder of three structure parameters: radius, length, and…

Soft Condensed Matter · Physics 2016-02-01 V. T. N. Huyen , Le Bin Ho , Vu Cong Lap , V. Lien Nguyen

In recent years, single element two-dimensional atom crystal materials have aroused extensive interest in many applications. Blue phosphorus, successfully synthesized on Au substrate by molecular beam epitaxy not long ago, shows unusual…

Materials Science · Physics 2018-10-16 Yipeng An , Songqiang Sun , Mengjun Zhang , Jutao Jiao , Dapeng Wu , Tianxing Wang , Kun Wang

The transport and distribution of charged particles are crucial in the study of many physical and biological problems. In this paper, we employ an Energy Variational Approach to derive the coupled Poisson-Nernst-Planck-Navier-Stokes system.…

Fluid Dynamics · Physics 2014-10-14 Shixin Xu , Ping Sheng , Chun Liu

A flexible multi-parameter exactly solvable model of potential profile, containing an arbitrary number of continuous smoothly shaped barriers and wells, both equal or unequal, characterized by finite values and continuous profiles of the…

Materials Science · Physics 2015-05-13 Alexander Shvartsburg , Vladimir Kuzmiak , Guillaume Petite

It has been suggested that microtubules and other cytoskeletal filaments may act as electrical transmission lines. An electrical circuit model of the microtubule is constructed incorporating features of its cylindrical structure with…

Subcellular Processes · Quantitative Biology 2010-06-28 Holly Freedman , Vahid Rezania , Avner Priel , Eric Carpenter , Sergei Y. Noskovd , Jack A. Tuszynski

Electrochemical phenomena in biology often unfold in confined geometries where micrometer- to millimeter-scale domains coexist with nanometer-scale interfacial diffuse charge layers. We analyze a model lipid membrane-electrolyte system…

Soft Condensed Matter · Physics 2025-08-20 Joshua B. Fernandes , Hyeongjoo Row , Kranthi K. Mandadapu , Karthik Shekhar

Exact calculations of transmission and reflection coefficients in surface randomly corrugated optical waveguides are presented. As the length of the corrugated part of the waveguide increases, there is a strong preference to forward…

Disordered Systems and Neural Networks · Physics 2009-10-31 A. Garcia-Martin , J. A. Torres , J. J. Saenz , M. Nieto-Vesperinas

We study the time evolution and driven motion of thin liquid films lying on top of chemical patterns on a substrate. Lattice-Boltzmann and molecular dynamics methods are used for simulations of the flow of microscopic and nanoscopic films,…

Soft Condensed Matter · Physics 2012-04-04 Fabian Dörfler , Markus Rauscher , Joel Koplik , Jens Harting , S. Dietrich

The electrostatic potential across a short ballistic molecular conductor depends sensitively on the geometry of its environment, and can affect its conduction significantly by influencing its energy levels and wave functions. We illustrate…

Mesoscale and Nanoscale Physics · Physics 2009-11-10 Gengchiau Liang , Avik Ghosh , Magnus Paulsson , Supriyo Datta

Porous graphene has high mechanical strength and atomic layer thickness, which make it a promising material for material separation and biomolecule sensing. Electrostatic interactions between charges in aqueous solution are a kind of strong…

Chemical Physics · Physics 2016-08-02 Yinghua Qiu , Kun Li , Weiyu Chen , Wei Si , Qiyan Tan , Yunfei Chen

A rotating particle in electrorheological (ER) fluid leads to a displacement of its polarization charges on the surface which relax towards the external applied field ${\bf E}_0$, resulting in a steady-state polarization at an angle with…

Chemical Physics · Physics 2008-05-30 J. J. Xiao , J. P. Huang , K. W. Yu

Centimeter scale aligned carbon nanotube arrays are grown from nanoparticle metal catalyst pads. We find the nanotubes grow both with and against the wind. A metal underlayer provides in-situ electrical contact to these long nanotubes with…

Mesoscale and Nanoscale Physics · Physics 2015-06-24 Shengdong Li , Zhen Yu , Christopher Rutherglen , Peter J. Burke

We have fabricated Pt-containing granular metals by focused electron beam induced deposition from the $(CH_3)_3CH_3C_5H_4Pt$ precursor gas. The granular metals are made of platinum nanocrystallites embedded in a carbonaceous matrix. We have…

Materials Science · Physics 2015-05-27 F. Porrati , R. Sachser , C. H. Schwalb , A. S. Frangakis , M. Huth

Partially overlapping two parallel armchair nanotubes are investigated theoretically with the $\pi$ orbital tight bonding model. Considering the interlayer Hamiltonian as perturbation, we obtain approximate analytical formulas of the…

Mesoscale and Nanoscale Physics · Physics 2019-04-12 Ryo Tamura

Geometric symmetries cause orbital degeneracies in a molecule's spectrum. In a single-molecule junction, these degeneracies are lifted by various symmetry-breaking effects. We study quantum transport through such nanostructures with an…

Mesoscale and Nanoscale Physics · Physics 2013-05-29 Maximilian G. Schultz , Felix von Oppen

We study the effects of solute interactions on osmotic transport through pores. By extending single-file, single-species kinetic models to include entrance of solute into membrane pores, we model the statistical mechanics of competitive…

Materials Science · Physics 2009-10-31 Tom Chou
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